PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97058 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 29204.4 Da PI: 9.3056 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.6 | 3.8e-12 | 69 | 120 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ +hn+ Er RR++ Ns + Lr+llP+ + + kK s ++ ++++YI +L OIS97058 69 KKLNHNASERDRRKKFNSLCSSLRSLLPPtD---HTKKISFPVTVARVIKYIPDL 120 6789*************************55...7777**************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MMAFSSPLFC NFGVCLADPK NNKLNTIEAP VSTGIPVHYS SSQPNIVHRQ FKNSDEINGD 60 NDHLDGTLKK LNHNASERDR RKKFNSLCSS LRSLLPPTDH TKKISFPVTV ARVIKYIPDL 120 KKEVERLTQK KEDLTLRSIP KKEYSADFNK QTIIKGGIQS SLSVISANQV GNGEVIIHIS 180 ILKTNKSSFA EAVSELEEEG LLLLNSSSFE TLGDRVFYNL HFQAQGTLPI KVQILRDKLL 240 SYYEKEDKLL PPWISGSFIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-30 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97058 |