PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96860 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10537 Da PI: 10.0318 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.5 | 2.4e-11 | 2 | 48 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 g+WTt +++ +a +++ + +W+ Iar +g g+++++++ ++ OIS96860 2 GSWTTKQNKRFEEALALYDRDtpdRWHNIARNVG-GKSAEEVRRHYEL 48 89*****************99*************.***********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MGSWTTKQNK RFEEALALYD RDTPDRWHNI ARNVGGKSAE EVRRHYELLL KDIMQIENDQ 60 IPLPKYKPAL TNVRGYANEQ RLLKNLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 1e-33 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96860 |