PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96765

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 1137aa MW: 127097 Da PI: 8.6483

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96765	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.7e-08	44	79	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++e+ ++++a +++G++ Wk++a+ + Rt +++ OIS96765 44 EWSEEDLTRFYQAYRKYGKD-WKKVAAAVK-PRTSEMV 79 7***************99.****998.7887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1137 aa Download sequence
MAPARKSRSV NKRFSPTTEI SPSKDDSAKK NLRKRKLSDM LGPEWSEEDL TRFYQAYRKY 60 GKDWKKVAAA VKPRTSEMVE ALYMMNRAYL SLPEGTASVV GLIAMMTDHY CNLAASDSEQ 120 ESNEDAGTSR KPQKRSRGKV QSNISKASEM TSPTLAASHG CLTLLKKKRS GGSRPRAVGK 180 RTPRFPVSFS CGNPKGEKYF SPSRQSLKLQ ADDTDDDVKI ALVLTEASQR VGSPQVSQTP 240 NRRTDSAMSS PVETAERNCV KIGMGNAKLL SNEVDEEEGS MEADTGELLR YKNDSVETGT 300 FGRTAQKGRR SYGKKLEIDD NGANHFDDIK EACSGTEEGQ ILGVVRGKLE MEATYEKNSR 360 TSLQGPRKRS KKVLFSRDES TAFDALQTLA DLSLMMPTAE NEDESMIQFN DEIDDHVDES 420 GSLEAVPANR QRDKRGSGGV RSRWSQPLSK FEVVSATKSK HGKVTSTDVT AVPEPKQARR 480 AHKAMSSKAR KTEGHVNNNV TGSEEAEAKE ASKKSTNKGK RSYQSASPKL IKDQEPSSCA 540 DPRTERSDSA QSTAEIPVAN QVNLPTKVRS RRKMDLKKPQ RQKDLKIPDK SLDDTSASFT 600 ALHDRAFSLK EKISNCLSNH QVRRWCTYEW FYSAIDYPWF AKRDFVEYLN HVGLGHVPRL 660 TRVEWGVIRS SLGKPRRFSE QFLNEEKEKL NQYRESVRTH YTELREGTRE GLPTDLARPL 720 SVGQRVIAIH PKTREIHDGS VLTVDRSRCR VQFDRPELGV EFVMDIDCMP LNPFENMPTL 780 LTRRADAVDK FFESFNELKV NARANEYMKF PACDNMENGN VFSHFSPPSH PISDLLKQTK 840 VASAEVDMQS RSGVVETATY QSTAYSKSSG VAQIQAKEAD VQALAELARA LDKKEAVVSE 900 LRRMNDDVLE NQKSNDCSLK DSEPFKKQYA AMLIQLNEVN EEVSSALYRL RQRNTYQGSI 960 PLAFPRPVPN FAVPSTLSTF DRCTSQPQES GFLVNEIIES SKIKARTMVD AAVQAMLSLT 1020 DRDNTTEKIE EAIGYVNDRI PLDDSCMPTQ PTDPKSKNMS DKNEAEVPSE LITKCVATLL 1080 MIQKCSERQF PPADVAKVLD SAVASLQPCC SQNFPIYAEI QQCMGIIRNQ ILALVPM

Sequence ? help Back to Top

Protein Sequence Length: 1137 aa Download sequence

MAPARKSRSV NKRFSPTTEI SPSKDDSAKK NLRKRKLSDM LGPEWSEEDL TRFYQAYRKY  60
GKDWKKVAAA VKPRTSEMVE ALYMMNRAYL SLPEGTASVV GLIAMMTDHY CNLAASDSEQ  120
ESNEDAGTSR KPQKRSRGKV QSNISKASEM TSPTLAASHG CLTLLKKKRS GGSRPRAVGK  180
RTPRFPVSFS CGNPKGEKYF SPSRQSLKLQ ADDTDDDVKI ALVLTEASQR VGSPQVSQTP  240
NRRTDSAMSS PVETAERNCV KIGMGNAKLL SNEVDEEEGS MEADTGELLR YKNDSVETGT  300
FGRTAQKGRR SYGKKLEIDD NGANHFDDIK EACSGTEEGQ ILGVVRGKLE MEATYEKNSR  360
TSLQGPRKRS KKVLFSRDES TAFDALQTLA DLSLMMPTAE NEDESMIQFN DEIDDHVDES  420
GSLEAVPANR QRDKRGSGGV RSRWSQPLSK FEVVSATKSK HGKVTSTDVT AVPEPKQARR  480
AHKAMSSKAR KTEGHVNNNV TGSEEAEAKE ASKKSTNKGK RSYQSASPKL IKDQEPSSCA  540
DPRTERSDSA QSTAEIPVAN QVNLPTKVRS RRKMDLKKPQ RQKDLKIPDK SLDDTSASFT  600
ALHDRAFSLK EKISNCLSNH QVRRWCTYEW FYSAIDYPWF AKRDFVEYLN HVGLGHVPRL  660
TRVEWGVIRS SLGKPRRFSE QFLNEEKEKL NQYRESVRTH YTELREGTRE GLPTDLARPL  720
SVGQRVIAIH PKTREIHDGS VLTVDRSRCR VQFDRPELGV EFVMDIDCMP LNPFENMPTL  780
LTRRADAVDK FFESFNELKV NARANEYMKF PACDNMENGN VFSHFSPPSH PISDLLKQTK  840
VASAEVDMQS RSGVVETATY QSTAYSKSSG VAQIQAKEAD VQALAELARA LDKKEAVVSE  900
LRRMNDDVLE NQKSNDCSLK DSEPFKKQYA AMLIQLNEVN EEVSSALYRL RQRNTYQGSI  960
PLAFPRPVPN FAVPSTLSTF DRCTSQPQES GFLVNEIIES SKIKARTMVD AAVQAMLSLT  1020
DRDNTTEKIE EAIGYVNDRI PLDDSCMPTQ PTDPKSKNMS DKNEAEVPSE LITKCVATLL  1080
MIQKCSERQF PPADVAKVLD SAVASLQPCC SQNFPIYAEI QQCMGIIRNQ ILALVPM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	36	KNLRKRK
2	32	37	LRKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIS96765