PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96748
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 273aa    MW: 30597 Da    PI: 6.2475
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96748genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.1e-182271255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa+a+++a+  l+g
  OIS96748 22 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAQAYDEAACLLRG 71
              799******.7******99932...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEQEQVYDST KEWSAKVPKQ RKFVGVRQRP SGKWVAEIKN TTQKIRMWLG TFDTAEEAAQ  60
AYDEAACLLR GSNTRTNFHN HAPVNPALSI KIRNLLNQKK SLNKINSKNP TSMQNNTTTA  120
ATATSTTISS CTSSLSVSNS FSSNTDTSGS RSHQKTQIFD DAYKPDLSNF MAGFDQMGSS  180
NFDHSSTFST DFDRILLDEK VGNFQVPKGG VVNEIGNVED QVTEFEHMKV ERQISASLYA  240
MNGVNEYWEN IHDCNIDAAV WDLPMLYQMF CPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-32ERF family protein