PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | YABBY | ||||||||
Protein Properties | Length: 187aa MW: 21113 Da PI: 8.659 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 220.6 | 4.6e-68 | 6 | 167 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsen 104 + +se++Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a + +++s + +++ +l+v + + ++ + s+++ ++ +++ + OIS96730 6 DVASEKLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFHSSSSSSSSWQ----DIH-QLQVPNYTAPEYRMDFGSSTKCNNRMTMRTP 101 5689*******************************************999999888886333....332.3344444444444444444444444455555 PP YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++++ + v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl OIS96730 102 ITNNTHEERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 167 55555555569*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MASCIDVASE KLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFHSSS 60 SSSSSWQDIH QLQVPNYTAP EYRMDFGSST KCNNRMTMRT PITNNTHEER IVNRPPEKRQ 120 RVPSAYNQFI KEEIQRIKAN NPDISHREAF STAAKNWAHF PHIHFGLMLE SNNQAKLSCG 180 SRKLSKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-86 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96730 |