PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96711
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 365aa    MW: 40346.5 Da    PI: 9.8452
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96711genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.3e-30292349359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+v+++tYegeH+h+
  OIS96711 292 DDFSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERALDDPNVLIVTYEGEHDHP 349
               99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MAVDLMTTGY RNNNTYTSKM EENAMQEAAA GLQSVEKLIR LLSQSQNHSQ KQNQSFQDPS  60
INTNSTLDFS PDYLAVADTA VNRFKKFISL LDRTRTGHAR FRRGPITTTS SPVLHKEPEL  120
LCLPEPSQNR PVEEKLKTEN PQAGSKIYCP TPIQRLPPLP LNHHHHHQQL VKNGSTSERK  180
ESTTTINFAT PSPANSFISS LTGDTESLQP SSMTSSGFQI TNLSQVSSAG RPPLSTSSFK  240
RKCSSMDDST VKCSSAGGSS GRCHCPKKRK SKVKRVVRIP AISMKMADIP PDDFSWRKYG  300
QKPIKGSPHP RGYYKCSSIR GCPARKHVER ALDDPNVLIV TYEGEHDHPF SITETPPAAI  360
VLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.17e-83WRKY family protein