PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96544

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 735aa MW: 81136.6 Da PI: 7.0821

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96544	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	534	566	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gLt +qV++WF N R + OIS96544 534 HPYPTDSDKHMLATQTGLTRNQVSNWFINARVR 566 89*****************************87 PP
2	BELL	103.6	1.4e-33	389	455	6	72
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +kkakL+ +++e+++rYkqy++q+q+v+ssFe+vagl +a+pY+slAlk iS+hFr+L++ai++++ OIS96544 389 LQKKAKLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRTAISDHL 455 57*************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MSDQTSEFHV AQQSRRERFR FNSEQGIQPY HYGNISYDPS VLSTEMFNFG TSTEPVVVSN 60 KDTMMMHNLE LRAASDRLDH RVSHDVTQNC SNWKSIDLQQ TGNCNWNNVG NYSSGSGVVI 120 ESNLSTPMFV GDQGLSGSLN LNNVSTIDVK PNFSDYQEIQ QSPVTNSSSN MQYSSTAVLY 180 HDTLQQVVTS ATVGTRGVEM PGCGSWTESG NELLLLPNYV DHSRPLHVKN SSDLVSRPVE 240 RCHQWISCEL GTNVSTSTAP DNSNAQALVL SLSPVSTSKT NMEQIEKRHA LCENFAIAHR 300 SAVPLGPFTG YATILKSSKF LRPAQQLMDE LCNLAAGSNA VTSSIFSKKV REGGVRVSGD 360 VSAAESSSGA IVGDSGGSSA ESNGRPDYLQ KKAKLIYMQD EICRRYKQYH QQMQMVVSSF 420 ETVAGLSAAT PYISLALKSI SQHFRSLRTA ISDHLKNIRQ ALGEDLPSPA TGMSKGDGTS 480 SKMKFVDQTL HKQKAGGAGV AFFESQQHVW RPQRGLPERA VAILRAWLFD HFLHPYPTDS 540 DKHMLATQTG LTRNQVSNWF INARVRVWKP MVEEIHTLET KGLGDQTGSS VRRSDGKLVT 600 ERPNHVNDGL NRSSISISNC GQHFNVLNMS GMSEKQDDCS GIGPSERLDE DILWKNQEKR 660 SRLECHIPAS MDGSLMGFVP YQRNGLEIGG IGAVSLTLGL RQNAEAAQQQ QQLQQLHEHR 720 LRQQFGGQMI HDFVD

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MSDQTSEFHV AQQSRRERFR FNSEQGIQPY HYGNISYDPS VLSTEMFNFG TSTEPVVVSN  60
KDTMMMHNLE LRAASDRLDH RVSHDVTQNC SNWKSIDLQQ TGNCNWNNVG NYSSGSGVVI  120
ESNLSTPMFV GDQGLSGSLN LNNVSTIDVK PNFSDYQEIQ QSPVTNSSSN MQYSSTAVLY  180
HDTLQQVVTS ATVGTRGVEM PGCGSWTESG NELLLLPNYV DHSRPLHVKN SSDLVSRPVE  240
RCHQWISCEL GTNVSTSTAP DNSNAQALVL SLSPVSTSKT NMEQIEKRHA LCENFAIAHR  300
SAVPLGPFTG YATILKSSKF LRPAQQLMDE LCNLAAGSNA VTSSIFSKKV REGGVRVSGD  360
VSAAESSSGA IVGDSGGSSA ESNGRPDYLQ KKAKLIYMQD EICRRYKQYH QQMQMVVSSF  420
ETVAGLSAAT PYISLALKSI SQHFRSLRTA ISDHLKNIRQ ALGEDLPSPA TGMSKGDGTS  480
SKMKFVDQTL HKQKAGGAGV AFFESQQHVW RPQRGLPERA VAILRAWLFD HFLHPYPTDS  540
DKHMLATQTG LTRNQVSNWF INARVRVWKP MVEEIHTLET KGLGDQTGSS VRRSDGKLVT  600
ERPNHVNDGL NRSSISISNC GQHFNVLNMS GMSEKQDDCS GIGPSERLDE DILWKNQEKR  660
SRLECHIPAS MDGSLMGFVP YQRNGLEIGG IGAVSLTLGL RQNAEAAQQQ QQLQQLHEHR  720
LRQQFGGQMI HDFVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	4e-90	TALE family protein

Link Out ? help Back to Top
Ensembl	OIS96544