PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96410 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 23987.9 Da PI: 5.411 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.6 | 2e-15 | 59 | 108 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + + rWv eIr p +k+ r++lg++ tae+Aa+a++ a+ +l+g OIS96410 59 TYRGVRKRN-SDRWVGEIRQP---NKKLRIWLGTYPTAEMAARAHDVAAIALRG 108 69****888.7*********8...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDMFRSYYSD PLTESSSLSE NSSSSCNRAN ISDEEVLLAS NNPKKQAGRK KFRETRHPTY 60 RGVRKRNSDR WVGEIRQPNK KLRIWLGTYP TAEMAARAHD VAAIALRGRS ACLNFAGSVW 120 KLPIPASADA KDIQRAAAEA AEAFGRPSES EADSGESAGT TPETPESSKF FMDEEALFCM 180 PGLLASMAEG LMLPPPHYVE VGDYVEAAAD MPLWSYTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 1e-59 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96410 |