PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96382

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HSF

Protein Properties

Length: 479aa MW: 53266.9 Da PI: 5.6077

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96382	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.2	7.2e-35	24	114	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d+++++++sw+ +g+sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF++++F k++k+ll++i+ OIS96382 24 FLLKTYEMIDDSQTDDIVSWTPTGHSFVVWNPPEFARILLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEEFVKDQKHLLKNIH 111 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k OIS96382 112 RRK 114 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MDVISATAAA AAGGGGGGGG PAPFLLKTYE MIDDSQTDDI VSWTPTGHSF VVWNPPEFAR 60 ILLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFANEEFV KDQKHLLKNI HRRKPIHSHS 120 HPPGSTVDPE RAAFEEEIDK LSREKSGLEA NVLRFRQQQS AAKLQLEEMT ERVGGIEQRQ 180 ESLLTFVEKA VLNPDFVQRL AQKLESMDIS AFSKKRRLPQ VDSSQPVQEN MSVDNHSSSR 240 VEFGNLCHQD FSNKLRLELS PAVSDINVVS CSTQSSNEDG GSPHRRISEG WSREVQLRTG 300 GVIYTPEAIE LSDTGTSFTL KMDSSLPRAA SNVESSRLHS LPQSLISNEE VDACQLNLSL 360 ASCLSQVDKN QHSVRMPQIG QEIGKHSESQ SDANGKNPPN DDKTLPLSHD ATNNKQGAAT 420 TQVRVNDVFW EQFLTERPGC SDNEEASSSF KGNSYDEQDD RKSSQGVASN TRKVEHLTL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MDVISATAAA AAGGGGGGGG PAPFLLKTYE MIDDSQTDDI VSWTPTGHSF VVWNPPEFAR  60
ILLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFANEEFV KDQKHLLKNI HRRKPIHSHS  120
HPPGSTVDPE RAAFEEEIDK LSREKSGLEA NVLRFRQQQS AAKLQLEEMT ERVGGIEQRQ  180
ESLLTFVEKA VLNPDFVQRL AQKLESMDIS AFSKKRRLPQ VDSSQPVQEN MSVDNHSSSR  240
VEFGNLCHQD FSNKLRLELS PAVSDINVVS CSTQSSNEDG GSPHRRISEG WSREVQLRTG  300
GVIYTPEAIE LSDTGTSFTL KMDSSLPRAA SNVESSRLHS LPQSLISNEE VDACQLNLSL  360
ASCLSQVDKN QHSVRMPQIG QEIGKHSESQ SDANGKNPPN DDKTLPLSHD ATNNKQGAAT  420
TQVRVNDVFW EQFLTERPGC SDNEEASSSF KGNSYDEQDD RKSSQGVASN TRKVEHLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-164	HSF family protein

Link Out ? help Back to Top
Ensembl	OIS96382