PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96354

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 422aa MW: 47456.6 Da PI: 7.9993

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96354	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.7	4.4e-18	89	179	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+k +++s+v++ +l++p+kf++++ +k + t++l de+ ++++ k+ ++k++ l++GW++F a++L egD++vF+l++ +f +v ++r+ OIS96354 89 FVKYMLHSHVSRGFWLSFPRKFCDSYL-PK-HDDTVVLVDENEEEFSTKYLIDKNG----LSGGWRGFSIAHNLLEGDVLVFQLIQPCKF--KVYIIRE 179 8999********************4.33.3459***********889998....***********************98888..8888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MAISAMNSSK KSPLLSSSKK RALEIKEKLL RKRALGPSKT NKVKNGDTKK LQICPEKKTY 60 KTSTVDANSS AMLRAEEVQA NLPSQFPSFV KYMLHSHVSR GFWLSFPRKF CDSYLPKHDD 120 TVVLVDENEE EFSTKYLIDK NGLSGGWRGF SIAHNLLEGD VLVFQLIQPC KFKVYIIREN 180 NLTEIDGAIS LLNLDLHARP IKSDIKQEEA VLIPDSDQGP ASDQRENDSD NGSEVLSIRF 240 SESRLEFKDV KDFSGFNILV DGLIIDAEIP AHIRTKYYDL CCTQNSFLHE HLLGGLNCKL 300 AAGMITETVN IADAIKASKI SIPRDYLETW DNTLKGFECL GMNVGFLRAR LSKLISMSCE 360 SDNILVSKRV KLAEAKEEMR NLEEKVLKVK QVIKKLDSEI EALTVKDTSF ELKFKALAAA 420 PW

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MAISAMNSSK KSPLLSSSKK RALEIKEKLL RKRALGPSKT NKVKNGDTKK LQICPEKKTY  60
KTSTVDANSS AMLRAEEVQA NLPSQFPSFV KYMLHSHVSR GFWLSFPRKF CDSYLPKHDD  120
TVVLVDENEE EFSTKYLIDK NGLSGGWRGF SIAHNLLEGD VLVFQLIQPC KFKVYIIREN  180
NLTEIDGAIS LLNLDLHARP IKSDIKQEEA VLIPDSDQGP ASDQRENDSD NGSEVLSIRF  240
SESRLEFKDV KDFSGFNILV DGLIIDAEIP AHIRTKYYDL CCTQNSFLHE HLLGGLNCKL  300
AAGMITETVN IADAIKASKI SIPRDYLETW DNTLKGFECL GMNVGFLRAR LSKLISMSCE  360
SDNILVSKRV KLAEAKEEMR NLEEKVLKVK QVIKKLDSEI EALTVKDTSF ELKFKALAAA  420
PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-40	B3 family protein

Link Out ? help Back to Top
Ensembl	OIS96354