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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIS96352 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | B3 | ||||||||
| Protein Properties | Length: 284aa MW: 32449.1 Da PI: 9.8747 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 52.1 | 1.2e-16 | 61 | 150 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
f k +++s+v++ +l+lp+ f++ h ++ ++t+tl des ++++ k+ ++++ l++GW++F a++L egD++vF+l + + l+v ++r
OIS96352 61 FMKPMIRSNVTAGFWLSLPRFFCQLHL--PRHDTTVTLVDESQEEYKTKYLAERNG----LSGGWRGFSLAHNLVEGDVLVFQLFRFCK--LKVYIVR 150
89*********************8884..35678****************555555....9**********************865344..4777766 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 284 aa Download sequence |
MSLRLQGTHK QVFCKKLKKR RSCKKKMAMM QNLYGRFDLA SSAKYRAEEV QSRLSTKYPS 60 FMKPMIRSNV TAGFWLSLPR FFCQLHLPRH DTTVTLVDES QEEYKTKYLA ERNGLSGGWR 120 GFSLAHNLVE GDVLVFQLFR FCKLKVYIVR ANYLAEVDAA LVLLHLDAHQ KQTDPAVHQM 180 QDNRSTKQAG IKRQRFSSQR DEDDYSAEEN MLHKHSHPRN MFKDLDLPSK AAGLAYGTLS 240 IVDAVKASKI NDPSNGFSSW NTTPTELEQL EITSFSGGYS IEPA |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 15 | 26 | KKLKKRRSCKKK |
| 2 | 20 | 26 | RRSCKKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G19184.1 | 2e-43 | B3 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIS96352 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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