PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96348

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 410aa MW: 44699.8 Da PI: 10.0143

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96348	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.5	1.2e-12	332	382	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ e+ ++ OIS96348 332 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELRKKQAEIMEK 382 689***************************************987776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGSYLNFKNF ADSPQPENNG GKSMCNGNFP LARQSSIYSL TFDELQTTFS GLGKDFGSMN 60 MEDLLKSIWT AEETQATAST TGGVDESVAA GNLQRQGSLT LPRTLSQKTV DEVWRDFQKE 120 TVSAKDGSST GNSNFGQRQS TLGEMTLEEF LVRAGVVRED MQCTNSNGIT FDNGSSQHSN 180 NNGLNIAFQQ PTQNNGLLIN QIAANNMLNV VGATPSQQQP QHQQPLFPKQ TTVAFASPMQ 240 LSNNGHLASP RTRAPVVGMS GPSVNTNMAQ GGVRGMTGFH NGVSPAKGGS PGNDFAARSN 300 TDTSSLSPSP YAFNEGGRGR RSGSSVEKVV ERRRRRMIKN RESAARSRAR KQAYTLELEA 360 EVAKLKEINE ELRKKQAEIM EKQKNQLLEK RNMPCGYKLG CLRRTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGSYLNFKNF ADSPQPENNG GKSMCNGNFP LARQSSIYSL TFDELQTTFS GLGKDFGSMN  60
MEDLLKSIWT AEETQATAST TGGVDESVAA GNLQRQGSLT LPRTLSQKTV DEVWRDFQKE  120
TVSAKDGSST GNSNFGQRQS TLGEMTLEEF LVRAGVVRED MQCTNSNGIT FDNGSSQHSN  180
NNGLNIAFQQ PTQNNGLLIN QIAANNMLNV VGATPSQQQP QHQQPLFPKQ TTVAFASPMQ  240
LSNNGHLASP RTRAPVVGMS GPSVNTNMAQ GGVRGMTGFH NGVSPAKGGS PGNDFAARSN  300
TDTSSLSPSP YAFNEGGRGR RSGSSVEKVV ERRRRRMIKN RESAARSRAR KQAYTLELEA  360
EVAKLKEINE ELRKKQAEIM EKQKNQLLEK RNMPCGYKLG CLRRTLTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.1	1e-72	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIS96348