PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96263

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 287aa MW: 31711.3 Da PI: 7.0992

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96263	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.9	3e-40	52	112	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ lkcprCdst+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s OIS96263 52 HDQPLKCPRCDSTHTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKKVS 112 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGITSLQVCM DSSNWLQDTI HEETELDSSS SPSGDIFTCS RPLIERKLRP QHDQPLKCPR 60 CDSTHTKFCY YNNYSLTQPR YFCKSCRRYW TKGGTLRNIP VGGGCRKNKK VSSKKLSNEN 120 ATNYQNPGSS SSSISSFPEM AFSHFTNFMG NNNPTNFMLE NPAPIDFMES KYEALVGSSR 180 NQDFLGNVDH LGMINGYGEI NGIAPNYHAG LCSTFGLPMD GNIMNYDGQN AIDVKPNPKV 240 LSLEWHDQGC SNSGNKESFG YFNGGLGSWT GLMNNGYGSS GTTNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	4e-45	Dof family protein

Link Out ? help Back to Top
Ensembl	OIS96263