PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96222
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 194aa    MW: 22049.8 Da    PI: 5.1484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96222genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-181362356
       AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              y+GVr +k +g+Wv+eIr+p   gk++r++lg++ t+e+Aa+a++ a+  l+ge
  OIS96222 13 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYETPEMAAAAYDVAAFHLKGE 62
              9****999.**********8...557***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEDHQEKSNI HMYRGVRKRK WGKWVSEIRE PGKKTRIWLG SYETPEMAAA AYDVAAFHLK  60
GERARLNFPE LTDSFPKPSS SKPEDVQMAA HEAAMRFKRQ TPEPPESGGC GGGGTVVPVR  120
VGLSSSQIQA INESPLDSPK MWMELAGALL LRDPVREYTC SSYSFTDPMV LGEDMVEFEE  180
WDEMQQHHDS IWDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-49ERF family protein