PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96083
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 377aa    MW: 42412.2 Da    PI: 4.4516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96083genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19130179255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  OIS96083 130 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
               89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MDHSMLCPIK YTEHKKTIRK VTKPSFIKPK KITETRKSSE YNPTIPRTVR ISVTDPDATD  60
SSSDEEELFG RKRVKRYINE ISIETSPIND VKPLNSGKAI KKRAAEASTP KQKALKVKVV  120
QPPPDGTVRK FRGVRQRPWG KWAAEIRDPA RRVRLWLGTY DTAEEAAMVY DNAAIKLRGP  180
DALTNFITPP TKPEEVNVAS NSGYESGDES HNLSSPTSVL RFRTSQSSEE AEQQSGSEPI  240
LEETKGDVCC PLVEEEAVLD SMDNSEQTVE HLECQGETSM IIPDYSNDYL PTDVPFLDDF  300
FNFEAAEQTL LDDTTSFAND LYTSYDDVSS WDFANDLLLD HEIVKFEDSF QDLGALEVDN  360
YFRDIGDFSS VDALLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-64ERF family protein