PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS95973 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 463aa MW: 51880.5 Da PI: 7.693 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.1 | 4.9e-30 | 226 | 285 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ ed +++++tYeg+Hnh+ OIS95973 226 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCFEDMTILITTYEGTHNHP 285 58**************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence |
MLRKDSAVDS ITTKIKATLT TTMNTNSRDS SLANKKNQED QLNSTKSQID EAKEENERLK 60 SMLSKIMKDY KSLQMHFQGI SQPDHKPQNS KDIIATSIEQ EEEVDLVSLS LGRSSREFKQ 120 DEKEYDQNEC KDIKKQSKLF DGLELGLDCR FSPDFTEVTK NYDDSQENSF EESKKEHMIS 180 HEPCQQNYLS SKMARISGDE DEDFLQQNPQ KKARVSIKAV CDTTTMNDGC QWRKYGQKIA 240 KGNPCPRAYY RCTVSPSCPV RKQVQRCFED MTILITTYEG THNHPLPFSA NAMASTTSAA 300 ASMLNCTSSS TSQQGITNAN NNNNNLHGFN FTTSNTNLLA THAPKTSIST SQTHPTITLD 360 FTTVPTTTSS STHTFSSQRY SSTSLNFSTL SSTPPSSSFI NSYTALCNNF KSQVGAGSYL 420 GRPSFYQPLT SNNTHNMTVE DSGEARNSIN WIKKKYKSVE PRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18860.1 | 3e-58 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS95973 |