PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIS95891 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22814.4 Da PI: 7.4394 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.7e-17 | 117 | 167 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrdp + k r++lg+f+ +Aa+a++ a+ k++g OIS95891 117 NYRGVRRRP-WGKFAAEIRDP---NkKGSRIWLGTFDADVDAARAYDCAAFKMRG 167 59*******.**********9...4345**********99*************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MTTPDEGLTL ELIRQHLLED FTSTELFINS LNSCFTDHIS PVFTSVKTEP STSNNSLSVS 60 LTSYPDSPIS HYFSDFPEFK TNSDTNLSPT SDSCVSSNST ISSDTTNSNN NENKVKNYRG 120 VRRRPWGKFA AEIRDPNKKG SRIWLGTFDA DVDAARAYDC AAFKMRGRKA ILNFPMDAGK 180 SGAPANIGRK RRRDNGIELE MLINL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 189 | 193 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07580.1 | 2e-45 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIS95891 |