PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS95793

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 398aa MW: 43811.4 Da PI: 7.459

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95793	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.1e-32	222	277	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OIS95793 222 KQRRCWSPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 277 79****************************************************97 PP
2	Myb_DNA-binding	43.7	6.4e-14	224	275	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ OIS95793 224 RRCWSPELHRRFLQALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 275 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MMINNHENNY TEKMQRCQQY IDALEQERNK IQVFSRELPL CLELVTQAIE TYKQQLSGTT 60 TEYNLNTQSD VECSEEHTSS DVPILEEFIP LKGTFSHEDE DEDERDSHKS KTYNISDTSC 120 SKDNKNSDKS CKKSDWLRSV QLWNNNQTPD PTPKEELTPK KVAVVEVKKN GSGGAFHPFK 180 KEKSAAATTE PPTSAVVTAA AGSSTAETGS GNKKEDKDEK RKQRRCWSPE LHRRFLQALQ 240 QLGGSHVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PSPSSIHNNH QQPPQFVVVG 300 GIWVPPPEYS AMAAAAPSAS GEASGVANSN GIYAPIATLP KGPLHDISGG TLKQRQHNNK 360 PSRSSERGSG SHSDGGGVHS NSPATSSSTH TTTASPPY

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MMINNHENNY TEKMQRCQQY IDALEQERNK IQVFSRELPL CLELVTQAIE TYKQQLSGTT  60
TEYNLNTQSD VECSEEHTSS DVPILEEFIP LKGTFSHEDE DEDERDSHKS KTYNISDTSC  120
SKDNKNSDKS CKKSDWLRSV QLWNNNQTPD PTPKEELTPK KVAVVEVKKN GSGGAFHPFK  180
KEKSAAATTE PPTSAVVTAA AGSSTAETGS GNKKEDKDEK RKQRRCWSPE LHRRFLQALQ  240
QLGGSHVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PSPSSIHNNH QQPPQFVVVG  300
GIWVPPPEYS AMAAAAPSAS GEASGVANSN GIYAPIATLP KGPLHDISGG TLKQRQHNNK  360
PSRSSERGSG SHSDGGGVHS NSPATSSSTH TTTASPPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	4e-80	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIS95793