PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95779
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 462aa    MW: 52514.7 Da    PI: 8.5173
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95779genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.6e-1327116198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ffk+    + ++ +rl++p +fa+++ ++  ++  + le +sg++Wev++    ++g+++l+ GW++F +   +  g f++F ++ rs f  +v++f+
  OIS95779  27 FFKII--LSQHECSRLRIPEDFASRYCKNMLNP--VYLEVPSGEVWEVEV--VHSRGQIYLGIGWQDFSDFYSISCGHFLMFGYNARSHF--NVTIFD 116
               66766..66677789***********5454444..***************..999999**************************999999..999987 PP
2B350.53.6e-16239320489
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                + ps+v++ ++l +p kfa+++ +++++  +l+l+ + +  W+vk++ r k     +  GWk Fv +n+Lk gD++v++++++++
  OIS95779 239 FMHPSYVTRPHNLAVPLKFARKYFMQNRG--KLVLRVPGSGFWTVKCTLRTKNA--RINCGWKAFVLDNKLKLGDVCVLEVIKDTK 320
               5789*******************777555..7***************6666554..59**********************988643 PP
3B349.48.2e-16368457498
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + ps+v+  + l++++  a+++  +  +   ++l+ ++ rsW +++++  k gr  l +GWk+Fv++n++k+gD++vF+ ++r++f ++v +f 
  OIS95779 368 PMQPSYVSGPS-LTISRVIASKFFPNRYS--GVVLQVPNKRSWALNCTVGTKNGR--LNSGWKKFVQDNNIKVGDVCVFEQVSRTKFLFNVYIFP 457
               56677777776.99999999888645444..5***************77555555..***********************888899988888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MAAKRQMRSG EGSSIWNSST NITQPKFFKI ILSQHECSRL RIPEDFASRY CKNMLNPVYL  60
EVPSGEVWEV EVVHSRGQIY LGIGWQDFSD FYSISCGHFL MFGYNARSHF NVTIFDLSAS  120
EIEYPTKEIE SDDSIDISDV VEHSVENLSH GPLGQERKRK RQEEEAEDDI PVNVQTKVIE  180
EEKSQGNVVS LERSEGCREQ EQQSNIATSK SDAERDKERA ENYQRAKAFK SKNPFIISFM  240
HPSYVTRPHN LAVPLKFARK YFMQNRGKLV LRVPGSGFWT VKCTLRTKNA RINCGWKAFV  300
LDNKLKLGDV CVLEVIKDTK LLLIDVTIFP GVSDSTNESI NPEPSVPCSP AYQRAKAFTS  360
ENPFFIYPMQ PSYVSGPSLT ISRVIASKFF PNRYSGVVLQ VPNKRSWALN CTVGTKNGRL  420
NSGWKKFVQD NNIKVGDVCV FEQVSRTKFL FNVYIFPAVE GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-18B3 family protein