PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS95761

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 791aa MW: 90543.3 Da PI: 6.615

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95761	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.6e-05	136	185	3	32
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C..................... CS HLH 3 rahnerErrRRdriNsafeeLrellPk.as...................k 32 +++n+ E+r+R ++ + f+ r+ lP+ ++ + OIS95761 136 KKANILEQRYRTNVGELFAHVRKKLPWaDPkvvkevidvelykllgertA 185 578************************55455555555555555555552 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MVKEEDSKTL ELFLKIGLDE KTAKNTLANN KVTTNLTAVI HEAAVTDGCD RTVGNLIYTV 60 ATKFPANALN HRPTLLQYIV STKIKTPAQL EAAFTFLAAT ASGDLNAQEF EEACGVGVEV 120 SKDDIERAVS EVFEEKKANI LEQRYRTNVG ELFAHVRKKL PWADPKVVKE VIDVELYKLL 180 GERTAADNEK PVKKKKEKPV KAEDKAKVDE TPAPKPSEEE LNPYSIFPSP EENYKVHTEI 240 YFSDRPVLRA SNSKELLEKH LKVTGRKVLT RFPPEPNGYL HIGHAKAMFV DFGLAKERGG 300 GCYLRFDDTN PEAEKKEYID HIKEIVGWMG WEPYRITHTS DYFQDLYELA VELIKRGHAY 360 VDHQTAEEVK EYRERKMNSP WRDRPIEESL RLFDEMKKGM IDEGKATLRM KQDMQSDNFN 420 MYDLIAYRIK FTPHPHAGDK WCIYPSYDYA HCIVDSLENI THSLCTLEFE TRRASYYWLL 480 DALGLYQPFV WEYSRLNVSN TVMSKRKLNR LVTEKWVDGW DDPRLMTLAG LRRRGVTSTA 540 INAFVRGIGI TRSDCSMIHL SRLEYHIREE LNKTAPRTMV VLNPLKVVIT NLEAGLVTDL 600 DAKKWPEAPA NDASSFYKVP FSRVVYIERT DFRLKDSKDY FGLAPGKSVL LRYAYPIKCT 660 DVILADDKET VLEIWAEYDP SKTTKPKGVL HWVAEPSPGV DPLKVEVRLF DRLFLSENPA 720 ELEDWLGDLN PESKVVIQNA YAVPLVRTAA LGDRFQFERL GYFAVDQDST SEKLVFNRTV 780 TLRDSYAKGG K

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MVKEEDSKTL ELFLKIGLDE KTAKNTLANN KVTTNLTAVI HEAAVTDGCD RTVGNLIYTV  60
ATKFPANALN HRPTLLQYIV STKIKTPAQL EAAFTFLAAT ASGDLNAQEF EEACGVGVEV  120
SKDDIERAVS EVFEEKKANI LEQRYRTNVG ELFAHVRKKL PWADPKVVKE VIDVELYKLL  180
GERTAADNEK PVKKKKEKPV KAEDKAKVDE TPAPKPSEEE LNPYSIFPSP EENYKVHTEI  240
YFSDRPVLRA SNSKELLEKH LKVTGRKVLT RFPPEPNGYL HIGHAKAMFV DFGLAKERGG  300
GCYLRFDDTN PEAEKKEYID HIKEIVGWMG WEPYRITHTS DYFQDLYELA VELIKRGHAY  360
VDHQTAEEVK EYRERKMNSP WRDRPIEESL RLFDEMKKGM IDEGKATLRM KQDMQSDNFN  420
MYDLIAYRIK FTPHPHAGDK WCIYPSYDYA HCIVDSLENI THSLCTLEFE TRRASYYWLL  480
DALGLYQPFV WEYSRLNVSN TVMSKRKLNR LVTEKWVDGW DDPRLMTLAG LRRRGVTSTA  540
INAFVRGIGI TRSDCSMIHL SRLEYHIREE LNKTAPRTMV VLNPLKVVIT NLEAGLVTDL  600
DAKKWPEAPA NDASSFYKVP FSRVVYIERT DFRLKDSKDY FGLAPGKSVL LRYAYPIKCT  660
DVILADDKET VLEIWAEYDP SKTTKPKGVL HWVAEPSPGV DPLKVEVRLF DRLFLSENPA  720
ELEDWLGDLN PESKVVIQNA YAVPLVRTAA LGDRFQFERL GYFAVDQDST SEKLVFNRTV  780
TLRDSYAKGG K

Link Out ? help Back to Top
Ensembl	OIS95761