PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95618
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 356aa    MW: 39051.6 Da    PI: 5.972
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95618genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.1e-21167217256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  OIS95618 167 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 217
               59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MAAAIDIYSN SSSVFSDPLS EELMKALEPF MKGASCSSSI SPSVSPSSSS SSPSTSSSCF  60
YPFGEPNLYT DFCTIPSSSF NPMGHVAETG SIGLNHLTPS QIFQIQAQIQ FQNQQQQQQL  120
LLQQQQSLGL LPTTPTYSKN LNSMNYLGLK PVPMKQTGGA IQKPTKLYRG VRQRHWGKWV  180
AEIRLPKNRT RLWLGTFDTA EEAALAYDKA AYKLRGEFAR LNFPHLRHQL NNELSDFKPL  240
HSSVDAKLQA ICQNLANSDD LSSNSNSDSK PRKSKKAAAK LDSVSVQDCP ENVNVKIEAP  300
SSSSPAPSEE SSSSSAVTSS PESDITFLDF IEPSFDESEN FFLPKYPSVE IDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-47ERF family protein