PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY14810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 238aa MW: 24868.1 Da PI: 8.0215 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.2 | 1.8e-40 | 24 | 124 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++C++apyf +eq + +fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l+ RDY14810.1 24 PCGACKFLRRKCVPGCIFAPYFDSEQgATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQ 122 7***********************9989********************************************************************998 PP DUF260 99 ee 100 + RDY14810.1 123 GH 124 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MSINSSCSIS GGNNNSGGNN GGSPCGACKF LRRKCVPGCI FAPYFDSEQG ATHFAAVHKV 60 FGASNVSKLL LNIPVHKRLD AVVTICYEAQ ARLRDPVYGC VAHIFALQQQ VVSLQAELSY 120 LQGHLATLEL PQPPPPPSSP QATMAPPVIS IADLPSSAST GPVTYDLSSL FDPMAQTPSW 180 AVQPRSIDSR QYVGSSGTSP TSASGGDLQA LARELLHRHG SASVVACSNP SSSHSHAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 1e-79 | LBD family protein |