PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDY14287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 326aa MW: 35867.5 Da PI: 6.6718 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52 | 1.7e-16 | 44 | 92 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIr p + + r++lg+f+ta+eAa a+++a+++++g RDY14287.1 44 FLGVRRRP-WGRYAAEIRNPLT---KERHWLGTFDTAQEAALAYDRAALSMKG 92 56******.**********743...4************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 326 aa Download sequence |
MSTSGTSETS LKNQTQMNSS PRQLNTSPSG ERRGRGKQAE PGRFLGVRRR PWGRYAAEIR 60 NPLTKERHWL GTFDTAQEAA LAYDRAALSM KGCQARTNFI YSKKDSNNTF HNVLTPLDAQ 120 PLLPPSHFLT NTQHNIQQPT IQSGLSHLGT ITSHIENPSQ DDNFFFSSDS NSGYLECIVP 180 DNCFRKSNAS SHVNSNSMQG QSHFDTTKEA LNMQTTNFAD FSYPSEVGQG LWDNQQSWGC 240 SSNELAAMFN NPSRVEEGFT HGPNYGLMTQ AEAVSSSTYS PSLPPFGDGC LSLSPSVLAL 300 HALPTSISFF DMESYSAKKN LENAIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18560.1 | 1e-43 | ERF family protein |