PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY13813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 250aa MW: 26749.6 Da PI: 7.4669 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.6 | 1e-38 | 54 | 155 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC +C++ap+f +q ++kfa+vhk+FGasnv+kll+++p ++r++a++++ yeA+ar++dPvyG+v++il+lqqq+++l+aela+l+ RDY13813.1 54 PCGACKFLRRKCIGGCIFAPHFGTDQgAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILALQQQVASLQAELAMLQ 152 7***********************9989*********************************************************************99 PP DUF260 99 eel 101 ++l RDY13813.1 153 SQL 155 885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MPDPQSGNGN GDGSGGDGNN NTSGSRRRST ASRRVMIAPS SSQEAMVGSS PTTPCGACKF 60 LRRKCIGGCI FAPHFGTDQG AAKFAAVHKV FGASNVSKLL SNIPANRRHE AATTISYEAQ 120 ARLSDPVYGC VSTILALQQQ VASLQAELAM LQSQLMNSRF AYASALHSTQ QLQQPNMNAA 180 ALQPAYSNNS CASTNLMNLG SFNNNPGFDL AMDTTPSSHT LEPLQLSRLS QYEEEDEEES 240 RTQQAFNHRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 9e-59 | LBD family protein |