PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13269.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

NF-YC

Protein Properties

Length: 836aa MW: 91804.6 Da PI: 7.9606

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.5	5.6e-55	655	758	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv RDY13269.1 655 QLQQFWSNQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 753 89****99999********************************************************************************** PP NF-YC 97 prdel 101 pr++l RDY13269.1 754 PREDL 758 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
VLGGSERSGG AGKRRKLFLL EQGTRKWGGS QQWRSGGEGD DCDGGSREKE SNRGMAVASR 60 PWLKLNASSL ILILFLVLVL IFFSVNPSSS PIPISPRRSL VVTPSPCTLD SNGLLNYHCL 120 FPHTSTLSLP SLSLFLLLHF YILITTAQHH FSIVTTKLAS HLNLSPSMAA VTLLSLGNGA 180 PDVFASLAAL RAGQYRTGFG AILSAGTFVS ALVVGFVAIY AAPFPVDPAP FVRDVLFYLT 240 AAFFLFYVYL SAEIFLWQAL GFVGFYFFFV GFVFYMDLGM ANRREKSSAD LEGHMEPDND 300 LDVSGSTDGE KRVSGFRRAI RLISKAWELP VSTLLRLTIP QPAPSQWSRF YASANIALCP 360 LALLYACNSF MPFNHPIVFL LPNIHFPLWS VVLVTSFSLA FLHFVMEKEP PKTEHMPVVV 420 MAFVMSVFWI STTAGELVNC LEAIGILLKL PPSLLGLTVL AWGNSVGDLV ADVAVAKAGH 480 PAMAMAGCFA GPMFNMLVGL GTALVIQTVN IYPRAYQLNF HVGIVIAFVF LLLSLMGSLL 540 VITWCRFRVP RFWGFCLVGV YVAFMAASVL IAMFSGMDHQ GHSQNPSMGV VGSGAQLTYG 600 SNPYQPGQIT GAPGSVVTSV GTIQSSSQPA GAQLGQHQLA YQHIHQQQQH QLQQQLQQFW 660 SNQYQEIEKV TDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVIFARACEM FILELTLRSW 720 NHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPREDLKD EVLASIPRGT MPVAGPADAL 780 PYCYMPPQHA PQVGPAGVIM GKPVMDPNMY AQQSHPYMAP HMWPQPPDQR QSSPEH

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

VLGGSERSGG AGKRRKLFLL EQGTRKWGGS QQWRSGGEGD DCDGGSREKE SNRGMAVASR  60
PWLKLNASSL ILILFLVLVL IFFSVNPSSS PIPISPRRSL VVTPSPCTLD SNGLLNYHCL  120
FPHTSTLSLP SLSLFLLLHF YILITTAQHH FSIVTTKLAS HLNLSPSMAA VTLLSLGNGA  180
PDVFASLAAL RAGQYRTGFG AILSAGTFVS ALVVGFVAIY AAPFPVDPAP FVRDVLFYLT  240
AAFFLFYVYL SAEIFLWQAL GFVGFYFFFV GFVFYMDLGM ANRREKSSAD LEGHMEPDND  300
LDVSGSTDGE KRVSGFRRAI RLISKAWELP VSTLLRLTIP QPAPSQWSRF YASANIALCP  360
LALLYACNSF MPFNHPIVFL LPNIHFPLWS VVLVTSFSLA FLHFVMEKEP PKTEHMPVVV  420
MAFVMSVFWI STTAGELVNC LEAIGILLKL PPSLLGLTVL AWGNSVGDLV ADVAVAKAGH  480
PAMAMAGCFA GPMFNMLVGL GTALVIQTVN IYPRAYQLNF HVGIVIAFVF LLLSLMGSLL  540
VITWCRFRVP RFWGFCLVGV YVAFMAASVL IAMFSGMDHQ GHSQNPSMGV VGSGAQLTYG  600
SNPYQPGQIT GAPGSVVTSV GTIQSSSQPA GAQLGQHQLA YQHIHQQQQH QLQQQLQQFW  660
SNQYQEIEKV TDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVIFARACEM FILELTLRSW  720
NHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPREDLKD EVLASIPRGT MPVAGPADAL  780
PYCYMPPQHA PQVGPAGVIM GKPVMDPNMY AQQSHPYMAP HMWPQPPDQR QSSPEH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	728	734	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-77	NF-YC family protein