PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13007.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 410aa MW: 44704.9 Da PI: 9.4247

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	171	193	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg++F+ ++L+ H+ + H RDY13007.1 171 PCSHCGEVFPKMESLELHQAVrH 193 688****************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MALLTSLPEH STPKRQKRKQ QQQQQHQQKQ NQKQKQPSSW DQIKNLITCK QIEGSRVHDP 60 SKVTGYSKLG SSCSSICSFR DVVHGNTRVV HRSDNSSPES SSLGQETGLL TRKPVATTRS 120 ATSASAKSNG GATYTSSSSR GMQFRKLSGC YECHMIIDPS RLPIARSTVC PCSHCGEVFP 180 KMESLELHQA VRHAVSELGP EDSGRNIVEI IFKSSWLKKD NPMCKIERIL KVHNTQRTIQ 240 RFEECRDMVK NRALSSSKKN PRCAADGNEL LRFHCTTLTC ALGARGSSSL CASVPGCGVC 300 TIVRHGFQGK CDGGDAKAKG VRTTASSGRA HDSVACGDGT RRAMLVCRVI AGRVKRVAED 360 APSEEEHVSG ASYDSVAGYA GIYSNLEELV VFNPKAILPC FVVVYKVLSC

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MALLTSLPEH STPKRQKRKQ QQQQQHQQKQ NQKQKQPSSW DQIKNLITCK QIEGSRVHDP  60
SKVTGYSKLG SSCSSICSFR DVVHGNTRVV HRSDNSSPES SSLGQETGLL TRKPVATTRS  120
ATSASAKSNG GATYTSSSSR GMQFRKLSGC YECHMIIDPS RLPIARSTVC PCSHCGEVFP  180
KMESLELHQA VRHAVSELGP EDSGRNIVEI IFKSSWLKKD NPMCKIERIL KVHNTQRTIQ  240
RFEECRDMVK NRALSSSKKN PRCAADGNEL LRFHCTTLTC ALGARGSSSL CASVPGCGVC  300
TIVRHGFQGK CDGGDAKAKG VRTTASSGRA HDSVACGDGT RRAMLVCRVI AGRVKRVAED  360
APSEEEHVSG ASYDSVAGYA GIYSNLEELV VFNPKAILPC FVVVYKVLSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-168	C2H2 family protein