PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY12253.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 820aa    MW: 90233.5 Da    PI: 6.4179
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY12253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-181674357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  RDY12253.1 16 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74
                5679*****************************************************97 PP
2START178.53.9e-561433512205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l +++l
  RDY12253.1 143 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELLYMQL 240
                 7899******************************************************.8888888888****************9999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l++s+++ ++
  RDY12253.1 241 YAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQ 339
                 ***************************************9988899***************************************************** PP

                 HHHHHHTXXXXX CS
       START 194 ktwvatlqrqce 205
                 kt++ +l+++++
  RDY12253.1 340 KTTMVALRQLRQ 351
                 *****9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 820 aa     Download sequence    
MAMSCKDGKL GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQTALPT KDTSCESAVT  120
SGQRSLTAQH PPRDASPAGL MSIAEETLAE FLSKATGTAV EWVQMPGMKP GPDSIGIVAI  180
SHGCTGVAAR ACGLVGLEPT RVAEILKDRP SWFRDCRAVD VLNVLPTANG GTIELLYMQL  240
YAPTTLAPAR DFWLLRYTSV LEDGSLVICE RSLKNTQNGP SMPPVQHFVR AEMLPSGYLI  300
RPCEGGGSII HIVDHMDLEP WSVPEVLRPL YESSTVLAQK TTMVALRQLR QISHEVSQSN  360
VTGWGRRPAA LRALGQRLSR GFNEAINGFT DEGWSMIGND GVDDVTVLVN SSPDKLMGLN  420
LSFANGFPSV SNAVLCAKAS MLLQNVPPAI LLRFLREHRS EWADNNMDAY SAAAIKVGPC  480
GLPGSRVGNY GGQVILPLAH TIEHEEFLEV IKLEGIAHSP EDTIMPREVF LLQLCSGMDE  540
NAVGTCAELI FAPIDASFAD DAPLLPSGFR IIPLDSGKEA SNPNRTLDLA SALDIGPTGN  600
RASNDYSGNS GCMRSVMTIA FEFAFESHMQ EHVASMARQY VRSIISSVQR VALALSPSHL  660
SSQAGLRTPL GTPEAQTLAR WICNSYRCYL GVELLKSNNE GNESLLKSLW HHSDAILCCT  720
LKALPVFTFA NQAGLDMLET TLVALQDITL EKIFDDHGRK ILCSEFPQII QQGFACLQGG  780
ICLSSMGRPI SYERVVAWKV LNEEENAHCI CFMFMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein