PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY11974.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ARR-B | ||||||||
Protein Properties | Length: 675aa MW: 73917.1 Da PI: 6.5138 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.6 | 5.7e-28 | 207 | 260 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++F+ av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl RDY11974.1 207 KPRVVWSVELHQQFMAAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKYRL 260 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.4 | 1.4e-12 | 209 | 259 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++ av+qlG + +k+I + m+ g+t++++ s++qky+ RDY11974.1 209 RVVWSVELHQQFMAAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKYR 259 678***********************************************7 PP | |||||||
3 | Response_reg | 77.3 | 5.6e-26 | 31 | 139 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+ y ev+ ++ +e al ll+e++ +D++l D+ mp+mdG++ll++i e +lp+i+++a + ++ + + +k Ga RDY11974.1 31 VLVVDDDPTCLMILERMLRACLY-EVTKCKRAEVALSLLRENKngFDVVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKNVVMKGVKHGAC 125 89*****************9999.***************999999**********************6654.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + RDY11974.1 126 DYLIKPVRIEALKN 139 **********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 675 aa Download sequence |
MNLSNGKGST SSSPLKTGDA VSDQFPVGLR VLVVDDDPTC LMILERMLRA CLYEVTKCKR 60 AEVALSLLRE NKNGFDVVLS DVHMPDMDGF KLLEHIGLEM DLPVIMMSAD DGKNVVMKGV 120 KHGACDYLIK PVRIEALKNI WQHVIRKRKS GGKDVEQSGS VEEVDRPQKG SDDGDYSSSV 180 NEGKSSKKRR DEEEEGEERD DTSALKKPRV VWSVELHQQF MAAVNQLGID KAVPKRILEL 240 MNVPGLTREN VASHLQKYRL YLRRLSGVSQ QHSNLNNSFM SSQEATFGST SINGIDLQTL 300 SVAGQLPSQS LAKLQAAGLG RSTAKPGMPM HLSEQKNLFS FENPRLRFGE GQLQHLSNSK 360 PINLLHGIPT SMEPKQLANL HQSTQSLGNM NMRVSAPAAQ NNPLLMHIAQ SQPIGQMLNE 420 NAGSHVTRFP SSLMQPTLPN GISNGVLGNG IAGTSNITTA YNSVPQNSSL LSFPMNHTNE 480 MSVGSFPLRS TPGITGIPSK GMFHEEGTSN IKGPGGFVQS YDMFNELHHQ KSHDWDLTNT 540 GMTYDTSQNA NPLQGNIDVS PSVLVHQGFP SMQQAAQNRD TTSIGKAMFT TGEGIHQGNL 600 QNVGQHHNNN NLFVDNSVRV KAERIPEPSS QINNLLSEQY GQEDLLSAFL KQQEGVGPSE 660 TEFDFDGYSL DNIPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 0.0 | ARR-B family protein |