PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11619.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 378aa MW: 41753 Da PI: 8.5921

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	106	151	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v +lG+ +W++Ia++++ gR++k+c++rw++ RDY11619.1 106 RGHWRPAEDAKLKELVDKLGPQNWNSIAEHLQ-GRSGKSCRLRWFNQ 151 899***************************.*********996 PP
2	Myb_DNA-binding	54.2	3.3e-17	158	201	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++ +eE+e+l+ a+k++G++ W+ I+r ++ gRt++ +k++w+ RDY11619.1 158 RKAFNEEEEERLLAAHKMYGNK-WAMISRLFP-GRTDNAVKNHWHV 201 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
VSMSNSLHFK NGGCGFYGAI NIFPSPPVLS SLLGPLSSLR SNTFGVMGHA GDTESESSDI 60 PFQTLNPSVQ PQEENEECFG IENMSLSLQP GEEVEGKIRH TKLCARGHWR PAEDAKLKEL 120 VDKLGPQNWN SIAEHLQGRS GKSCRLRWFN QLDPRINRKA FNEEEEERLL AAHKMYGNKW 180 AMISRLFPGR TDNAVKNHWH VIMARRQREK SCVYRRRKPT FQTLPKDLNL TLPKNAGSES 240 TISSIIIDES ASTGTNLSLT PSSAKPIPMP FQNPCPVQNH QAFGALMGLS GESRTPARDV 300 GFDKYFGAWK GSREAGHIRR LMGVDQSHYS DSNSSEVTVS ESVATDRTIN LSISGASKNM 360 GDNKANMSFI DFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

VSMSNSLHFK NGGCGFYGAI NIFPSPPVLS SLLGPLSSLR SNTFGVMGHA GDTESESSDI  60
PFQTLNPSVQ PQEENEECFG IENMSLSLQP GEEVEGKIRH TKLCARGHWR PAEDAKLKEL  120
VDKLGPQNWN SIAEHLQGRS GKSCRLRWFN QLDPRINRKA FNEEEEERLL AAHKMYGNKW  180
AMISRLFPGR TDNAVKNHWH VIMARRQREK SCVYRRRKPT FQTLPKDLNL TLPKNAGSES  240
TISSIIIDES ASTGTNLSLT PSSAKPIPMP FQNPCPVQNH QAFGALMGLS GESRTPARDV  300
GFDKYFGAWK GSREAGHIRR LMGVDQSHYS DSNSSEVTVS ESVATDRTIN LSISGASKNM  360
GDNKANMSFI DFLGVGAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	219	RRQREKSCVYRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	4e-66	MYB family protein