PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09545.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 557aa MW: 61063.4 Da PI: 6.7189

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.8	1.8e-22	115	216	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+ltpsd+++ g +++p+ +a++ ++ + l+++d +g W++++iyr++++r+++t+GW++Fv+ ++L +gD+vvF ++se++ RDY09545.1 115 FSKILTPSDANNGGGFSVPRFCADSVfppldfrADPPVQ--LLSITDVHGVAWRFRHIYRGTPRRHLFTTGWSKFVNHKKLIAGDSVVFV--RDSEGKV 209 88***************9999999*97556555..799******************************************..5689999 PP EEEEE-S CS B3 93 vvkvfrk 99 v+++r+ RDY09545.1 210 SVGIRRA 216 **996 PP
2	Auxin_resp	73.2	7.6e-25	247	324	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 aa++a+ + +FevvY+Pra+ ++Fvv++e v +a+k+ + GmR+k+ +etedss+ ++ +Gtv++ + d+ +Wr+L RDY09545.1 247 AAESAARNAPFEVVYYPRAGFADFVVSAEVVDEAMKCAWVGGMRVKIGMETEDSSRMTWfQGTVSSAHGHDN-----GPWRML 324 688999**************************************************************9777.....556665 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MPPPQPRRVD PKIWRACAGA AVHIPKLHSR VYYFPQGHME HASPSHTHSL SPLLRSLPFV 60 PCHVSSLDLL ADPLSDEVFA KILLTPLPRQ HPFHHDQNDN RNQNDSDEQT DVVSFSKILT 120 PSDANNGGGF SVPRFCADSV FPPLDFRADP PVQLLSITDV HGVAWRFRHI YRGTPRRHLF 180 TTGWSKFVNH KKLIAGDSVV FVRDSEGKVS VGIRRAARFV TNSEAGEVEA ESRFATGRVS 240 VKAVAAAAES AARNAPFEVV YYPRAGFADF VVSAEVVDEA MKCAWVGGMR VKIGMETEDS 300 SRMTWFQGTV SSAHGHDNGP WRMLQVNWDE PEVLQNAKRV SPWQVELVSP TLALHTVFPP 360 TKRFRAEQGS GLLSDRDGDP FFPMTGFPNS SMGHLNKKLL SYDNFPAGMQ GARHDLFSAS 420 SFSNFLNDNS YLYMGSSSFG NNTVRSLGTV STELNIGSSQ SDDLSPHSQS SFHSFGTEVT 480 GTHNCNTKVG SGSILLFGKV IQPVESDLHD ADCIGGDGSG GCKETEGIDN LLDHSLTYSK 540 LLNKLDVQCQ PVSPDTS

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MPPPQPRRVD PKIWRACAGA AVHIPKLHSR VYYFPQGHME HASPSHTHSL SPLLRSLPFV  60
PCHVSSLDLL ADPLSDEVFA KILLTPLPRQ HPFHHDQNDN RNQNDSDEQT DVVSFSKILT  120
PSDANNGGGF SVPRFCADSV FPPLDFRADP PVQLLSITDV HGVAWRFRHI YRGTPRRHLF  180
TTGWSKFVNH KKLIAGDSVV FVRDSEGKVS VGIRRAARFV TNSEAGEVEA ESRFATGRVS  240
VKAVAAAAES AARNAPFEVV YYPRAGFADF VVSAEVVDEA MKCAWVGGMR VKIGMETEDS  300
SRMTWFQGTV SSAHGHDNGP WRMLQVNWDE PEVLQNAKRV SPWQVELVSP TLALHTVFPP  360
TKRFRAEQGS GLLSDRDGDP FFPMTGFPNS SMGHLNKKLL SYDNFPAGMQ GARHDLFSAS  420
SFSNFLNDNS YLYMGSSSFG NNTVRSLGTV STELNIGSSQ SDDLSPHSQS SFHSFGTEVT  480
GTHNCNTKVG SGSILLFGKV IQPVESDLHD ADCIGGDGSG GCKETEGIDN LLDHSLTYSK  540
LLNKLDVQCQ PVSPDTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-142	ARF family protein