PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09197.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 439aa MW: 50280.4 Da PI: 4.3021

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.7	4e-15	124	209	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W ++e+ +L+e+ ++ +l+r++l+ W ev++k+ +e ++er+ +qC++ +++l++rykk+k+++ + s +++yf++++ RDY09197.1 124 EWNEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVsEELKVERTVTQCRSVLDKLKRRYKKEKARMDEM-GLGSCKWAYFKKMD 209 5***********************************8889************************96.88889******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MDDMEDDARY PPKSFSLNRQ NPSHRHKHPI RAAPYQRPMP TRYEEVPDDD DDDEPEDFDE 60 DENDDDEGEN GYDATMMEEN DVVGYPRIPK KRKVAVGGGS SYEFAPRVKF PYGTRGSGSG 120 SGEEWNEHET FVLLEVWGDK FLQLGRNSLR SEEWHEVAEK VSEELKVERT VTQCRSVLDK 180 LKRRYKKEKA RMDEMGLGSC KWAYFKKMDM LMASSARQEY GLACGVDSGE YVFMNTRVYL 240 NSSNGFDEMR DSPGESESDD DDDDDECGGD EEDETSYRVL ADSIQKFGKI YEKIENSKRQ 300 QMMELEKMRL DFNRELELQK KHILERAQAE IAKIQEGDEE GTDTSGENLT DISPQEAKDV 360 MTDTVCLIRR YNLEKGGDIW IECTSFGGKI VYKLREIPLA ALNDGTIHGP NGPLFFRVLV 420 KTGMTEFDDS ENGEDQTIG

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MDDMEDDARY PPKSFSLNRQ NPSHRHKHPI RAAPYQRPMP TRYEEVPDDD DDDEPEDFDE  60
DENDDDEGEN GYDATMMEEN DVVGYPRIPK KRKVAVGGGS SYEFAPRVKF PYGTRGSGSG  120
SGEEWNEHET FVLLEVWGDK FLQLGRNSLR SEEWHEVAEK VSEELKVERT VTQCRSVLDK  180
LKRRYKKEKA RMDEMGLGSC KWAYFKKMDM LMASSARQEY GLACGVDSGE YVFMNTRVYL  240
NSSNGFDEMR DSPGESESDD DDDDDECGGD EEDETSYRVL ADSIQKFGKI YEKIENSKRQ  300
QMMELEKMRL DFNRELELQK KHILERAQAE IAKIQEGDEE GTDTSGENLT DISPQEAKDV  360
MTDTVCLIRR YNLEKGGDIW IECTSFGGKI VYKLREIPLA ALNDGTIHGP NGPLFFRVLV  420
KTGMTEFDDS ENGEDQTIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	DKLKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	3e-88	Trihelix family protein