PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY08916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 166aa MW: 18047.4 Da PI: 7.8619 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 144.7 | 2.8e-45 | 14 | 113 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++l e++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++ RDY08916.1 14 PCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLRTQLAVAQA 112 7**********************************************************************************************9997 PP DUF260 100 e 100 e RDY08916.1 113 E 113 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MKDGGGRKQG APSPCAACKL LRRRCAQDCV FAPYFPADEP QKFANVHKVF GASNVNKMLQ 60 DLAEHQRGDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI DVLRTQLAVA QAEAVHLRVR 120 QSASLYSPTS PSNSGSPSSK IIESQPNPIF DMDMVVDQTT YGDSIW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 9e-71 | LBD family protein |