PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08787.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 327aa MW: 36348.6 Da PI: 6.9886

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.2e-05	124	143	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ RDY08787.1 124 FSCSVCNKMFNRFNNMQMHM 143 89*****************9 PP
2	zf-C2H2	13.7	0.00018	209	231	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ RDY08787.1 209 FGCRKCGKPFAVRGDWRTHEKNC 231 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MQTHSFSYIS SCPGGAFLEP DHEAVDEASI SLSLGPPGQQ HNNPKTSSSS SNHPSTLHHY 60 QQNPISDDQR GVTVALHIGL PSPTTSPNSA TLTSKPDLHL ASAPIQGQYW IPSPAQILIG 120 PTQFSCSVCN KMFNRFNNMQ MHMWGHGSQY RKGPESLRGA KPASSMLRLP CYCCAEGCKN 180 NIDHPRSRPL KDFRTLQTHY KRKHGAKPFG CRKCGKPFAV RGDWRTHEKN CGKLWFCICG 240 SDFKHKRSLK DHVRAFGDGH APHTVESCDQ MGEDDLLGDE DDEELELEDD DEDYNSNEVV 300 YGCEKMETNS EMKAKVLAFN ARSGSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-120	C2H2 family protein