PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY08042.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family Trihelix
Protein Properties Length: 553aa    MW: 63022.4 Da    PI: 7.2866
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY08042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.79.8e-1690153270
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 Wt++evlaL ++r++me+++ +       We+vs+k++e gf++s+++Ckek+e+ ++++ +i+ g+++
  RDY08042.1  90 WTNDEVLALFRIRSSMENWFPQL-----TWEHVSRKLAELGFKKSAEKCKEKFEDESRYFDNINYGKNN 153
                 ********************987.....9*******************************999987765 PP
2trihelix96.13.2e-30415504185
    trihelix   1 rWtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 rW+++evlaLi++r       + +++ ++g++k+plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql
  RDY08042.1 415 RWPRDEVLALINLRCtsvsnnNNNNEEKEGNSKGPLWERISQGMTELGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLNSRTCPYFHQL 504
                 8*************86665555555555689*********************************************8.89999*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    
MFDGAADQFH QFIAPRTTLP LHLSNFPLHP SPTPNTFLPF DPYNPLPLQT NLLHSLHPPS  60
PTHKHNKEPN TILAPILQIQ RQLPDLTDSW TNDEVLALFR IRSSMENWFP QLTWEHVSRK  120
LAELGFKKSA EKCKEKFEDE SRYFDNINYG KNNYRFLSEL EELCQNPDPG GGAGDETDKT  180
QHHHALEENS RATEACDKVV VEKSKERKRK RRDRFEMFKG FCESVVNKMM AQQEEIHCKL  240
LEDMVKRDQE KFAREEAWKK QEMERMNKEL QIMAQEQAIA GDRHATIIEF LKKYATLSPA  300
CQNVPNSPRT AMLHPQNPNN PSIQNTNLDP EMIPNHFDQT TLGAENPSTS DTLLQVPSSS  360
NSSPAPHNPS SSSLNSHNSN IIPLESNSVS TYKSTSTTPT PMVSSENSKE DVGRRWPRDE  420
VLALINLRCT SVSNNNNNNE EKEGNSKGPL WERISQGMTE LGYKRSAKRC KEKWENINKY  480
FRKTKDVNKK RSLNSRTCPY FHQLSCLYGQ GKIVPHSQRE GNPTSNSGQV PPDQPQPDES  540
SQVGSSALVQ YAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207212RKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.13e-38Trihelix family protein