PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY07538.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 604aa MW: 67582.9 Da PI: 6.0194

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY07538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.5	7.5e-11	76	144	1	64
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkG 64 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g++W +++i+r++++r++lt+G RDY07538.1 76 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 144 99**************************964333..4459*************************99 PP
2	Auxin_resp	112.9	3.1e-37	182	264	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+++ +err+sGt+vgv d +++ Wp+S+WrsLk RDY07538.1 182 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSLVWPDSEWRSLK 264 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MEQLEASMYE GLEQQMPCFN LPSKILCKVV NIHLRAEPET DEVYAQITLL PEADQSEVTS 60 PDDPLPESPR VKVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ PPWQELVATD 120 LHGNEWHFRH IFRGQPRRHL LTTGGENGEL RVGVRRLMRQ QSNVPSSVIS SHSMHLGVLA 180 TASHAIATGT LFSVFYKPRT SRSEFIVSVN KYLEAQSHKL SVGMRFKMRF EGDEIPERRF 240 SGTIVGVGDN KSLVWPDSEW RSLKVQWDEP SSILRPDRVS SWELEPLVST TPANSQPTQR 300 NKRARPLILP STMPDSSMQG IWKSPVESTS FSYCDPQLGR GFYPSPKFNS SATNFLGFGN 360 SSVGPPSNKS IYWSNRMQNS MESISAIAHK DAGEKRQGTG NGCRLFGIQI LENSNAEGNL 420 QTVTLSGRVG DDRSVPSLDA ESDQHSEPSN ANRSDIPSVS CDAEKSCLQS PQESQSKQIR 480 SCTKVHMQGM AVGRAVDLTR FDGYEDLLRK FEEMFDIKAE LCGSQKKWQV VYTDNEDDMM 540 MVGDYPWDEF CTVVRKIFIY TAEEVKKLSP KIGLPINENF KASKLDSETI VNPEDQSFNV 600 GPSC

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MEQLEASMYE GLEQQMPCFN LPSKILCKVV NIHLRAEPET DEVYAQITLL PEADQSEVTS  60
PDDPLPESPR VKVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ PPWQELVATD  120
LHGNEWHFRH IFRGQPRRHL LTTGGENGEL RVGVRRLMRQ QSNVPSSVIS SHSMHLGVLA  180
TASHAIATGT LFSVFYKPRT SRSEFIVSVN KYLEAQSHKL SVGMRFKMRF EGDEIPERRF  240
SGTIVGVGDN KSLVWPDSEW RSLKVQWDEP SSILRPDRVS SWELEPLVST TPANSQPTQR  300
NKRARPLILP STMPDSSMQG IWKSPVESTS FSYCDPQLGR GFYPSPKFNS SATNFLGFGN  360
SSVGPPSNKS IYWSNRMQNS MESISAIAHK DAGEKRQGTG NGCRLFGIQI LENSNAEGNL  420
QTVTLSGRVG DDRSVPSLDA ESDQHSEPSN ANRSDIPSVS CDAEKSCLQS PQESQSKQIR  480
SCTKVHMQGM AVGRAVDLTR FDGYEDLLRK FEEMFDIKAE LCGSQKKWQV VYTDNEDDMM  540
MVGDYPWDEF CTVVRKIFIY TAEEVKKLSP KIGLPINENF KASKLDSETI VNPEDQSFNV  600
GPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein