PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY06916.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 280aa MW: 31603.9 Da PI: 7.3667

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY06916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	141	195	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k RDY06916.1 141 RKKLRLSKEQSAFLEDSFKEHTTLTPKQKLALAKELNLRPRQVEVWFQNRRARTK 195 778899***********************************************98 PP
2	HD-ZIP_I/II	127.5	5.9e-41	141	230	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LE+sF+e+++L+p++K +la+eL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l RDY06916.1 141 RKKLRLSKEQSAFLEDSFKEHTTLTPKQKLALAKELNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKELQELR-AL 230 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDSRAFVNVY LPKAKAEEEI KSNSWRMELT LSLGDAPMPT NNDSVGFCIA LRHDKRSSLG 60 SDPPLQLDLL PSTPVLSSSH LPIPWLSHPQ VPGPRLNDTD DATALSSPNS AVSSFQMNFC 120 VPRREHEAED ASEDDENAST RKKLRLSKEQ SAFLEDSFKE HTTLTPKQKL ALAKELNLRP 180 RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ESLTEENRRL QKELQELRAL KTCQPFYMQL 240 PATTLTMCPS CERIATNTAA NNNASQIPVA LSVDKPRLLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	146	TRKKLRL
2	190	198	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-74	HD-ZIP family protein