PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY06518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 102aa MW: 11847.6 Da PI: 10.3906 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.1 | 1.8e-12 | 46 | 91 | 6 | 55 |
AP2 6 VrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 Vr++ grW AeI+d s ++ r +lg+f+ ae+Aa a++ a++ ++g RDY06518.1 46 VRQRT-LGRWIAEIKDSS---QKLRLWLGTFDKAEDAALAYDCAARLIRG 91 89888.8*********42...36**********************98887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MENVDTSKFP HQPQKQESSL GDKSYEKRVM KIPKAGNKSE KKFLEVRQRT LGRWIAEIKD 60 SSQKLRLWLG TFDKAEDAAL AYDCAARLIR GRMPKQTFQT ME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-13 | ERF family protein |