PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY06141.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family NF-YC
Protein Properties Length: 265aa    MW: 29672.5 Da    PI: 6.5837
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY06141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC176.62.5e-55851872101
       NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                 l++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivp
  RDY06141.1  85 LQAFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 183
                 89*****99999*************************************************************************************** PP

       NF-YC  98 rdel 101
                 r++l
  RDY06141.1 184 REDL 187
                 *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDHQGHGHGQ TPSMGVVGSG TQLPYGSNPY QASHIAGSPG MVVASPGTLQ STGQPSATQL  60
AQQQLAYQHI HQQQQQQQQQ LQQRLQAFWA NQYQEIEKVT DFKNHSLPLA RIKKIMKADE  120
DVRMISAEAP VIFARACEMF ILELTLRSWN HTEENKRRTL QKNDIAAAIT RTDIFDFLVD  180
IVPREDLKDE VLASMPRGTV PVTGPAETLP YCYMPPQHPQ QVGTAGVIMG NKPLMDPYAQ  240
QTHPYNMTPQ MWPQPPEHQQ SSSDQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157163RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.32e-80NF-YC family protein