PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY05942.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GATA
Protein Properties Length: 279aa    MW: 30503.7 Da    PI: 6.5892
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY05942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.3e-16184220135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  RDY05942.1 184 CTHCGISSksTPMMRRGPSGPRSLCNACGLFWANRGT 220
                 *****99999***********************9997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MYGPMNQIVP AEDNDAAAAS DHHIHYNSHA VEDATGAVED VSADSVYVSP PDITIQDSSQ  60
LTLSFRGQVY VFDAVQAVLL LLGGSELTSG SQCAEISPQN QGGAVEYPAR CSLPQRAAAL  120
SRFRQKRKDR CFDKKVRYGV RQEVALRMHR NKGQFTSSKK QDGTNSWGSD QESGQDAVQS  180
ETSCTHCGIS SKSTPMMRRG PSGPRSLCNA CGLFWANRGT LRDLSKRNQD HSLAPPEQAC  240
YLSLRMVDEG SNNDLDCRSA IPEQHNNHVN DNTALVSDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-82GATA family protein