PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 279aa MW: 30503.7 Da PI: 6.5892 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.8 | 2.3e-16 | 184 | 220 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp+g+++LCnaCGl+++ +g+ RDY05942.1 184 CTHCGISSksTPMMRRGPSGPRSLCNACGLFWANRGT 220 *****99999***********************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MYGPMNQIVP AEDNDAAAAS DHHIHYNSHA VEDATGAVED VSADSVYVSP PDITIQDSSQ 60 LTLSFRGQVY VFDAVQAVLL LLGGSELTSG SQCAEISPQN QGGAVEYPAR CSLPQRAAAL 120 SRFRQKRKDR CFDKKVRYGV RQEVALRMHR NKGQFTSSKK QDGTNSWGSD QESGQDAVQS 180 ETSCTHCGIS SKSTPMMRRG PSGPRSLCNA CGLFWANRGT LRDLSKRNQD HSLAPPEQAC 240 YLSLRMVDEG SNNDLDCRSA IPEQHNNHVN DNTALVSDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 4e-82 | GATA family protein |