PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 266aa MW: 30596.2 Da PI: 10.2869 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 89.8 | 4.6e-28 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp+G+rF+P d+ l +yL+kk+ +++l+ + i+++d++++ePw Lp ++ +w +fF ++++ ++ +r + +g W+ k ++v +++ RDY05846.1 14 LPVGYRFDPADDVLAGYYLRKKMLTQPLPN-DLIQDCDVFQTEPWGLPGGG--KHLNWqrFFFYDTRTRVF-ENIDKRDAGNGQWRVVEKLQDVELTSK 108 799*************************99.99***************433..333555466666666554.5678888899**************999 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++ +++Lvf++++ ++ kt+Wvmhe+rl RDY05846.1 109 QVIAKRNVLVFWEANGNSFAKTNWVMHEFRL 139 99***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MEILNPAKGK TYKLPVGYRF DPADDVLAGY YLRKKMLTQP LPNDLIQDCD VFQTEPWGLP 60 GGGKHLNWQR FFFYDTRTRV FENIDKRDAG NGQWRVVEKL QDVELTSKQV IAKRNVLVFW 120 EANGNSFAKT NWVMHEFRLA PKSNQSLMSA MAVYRIFEMK QVRKRKKARA SKAVASNSSD 180 AGEVVDPIVI DFTLENGSVS GPPSPRYPMG EHTNLTTRMV VPKVLMASAH GFDSHPSFHR 240 TQYSIYEILS FTLRRKRLFF LVEVRI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 166 | KQVRKRK |
2 | 163 | 167 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.2 | 1e-21 | NAC family protein |