PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 231aa MW: 25487.9 Da PI: 8.7251 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 115.7 | 3e-36 | 38 | 139 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+ rrkC ++C++apyf +eq +++fa+vhk+FG + v+k+l+++ ++r+++++sl+yeA+ar+ dPvyG+++ i + q+q+++l+ael +++ RDY05574.1 38 PCGACKYIRRKCHNQCIFAPYFVSEQgSAQFAMVHKVFGINSVSKMLSNVAVDHRQEVVASLLYEAQARLADPVYGCLSAIVAFQKQVASLQAELLMRQ 136 7***********************9989*******************************************************************9999 PP DUF260 99 eel 101 ++l RDY05574.1 137 NQL 139 875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MADQPQKGGD EATSRVTNKR KGKGTNKEHP KSEVTSPPCG ACKYIRRKCH NQCIFAPYFV 60 SEQGSAQFAM VHKVFGINSV SKMLSNVAVD HRQEVVASLL YEAQARLADP VYGCLSAIVA 120 FQKQVASLQA ELLMRQNQLI NTRISYATLL QSIQQQPQPN INVVVQPTYS NNSPNSTNLM 180 SFSNPGFDHL AMQTASSSHN LEPLQFSGLP QNEEESRIPQ VFNNGMAHLI P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 1e-49 | LBD family protein |