PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY05476.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GATA
Protein Properties Length: 327aa    MW: 35703.2 Da    PI: 8.2128
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY05476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.35.2e-19239272134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C++tkTp+WR+gp g+ktLCnaCG++yr+ +
  RDY05476.1 239 CMHCQVTKTPQWREGPMGPKTLCNACGVRYRSGR 272
                 99*****************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
DIANMKDSWF FDNNFNGLSD EIFDDVVNFF DFPLEDVDAN VVEEDLDAQF KCLEDPRFDV  60
FSASSAGLCG KAQNEKPQLG MGFSASVSIL STVMCNGISP IKQLAMAPGP TYGIGKTIPN  120
QNASFNGKDL HQFQMYSPVS VFESSSSSSA ENSNVDRPPI PVKRARGKRQ RLSSFSPLFS  180
SPFILISPAL QKHQRTGASE SDFGTNVAGN LSNKEKRQRK KDLSLLSDEV LESDAPRKCM  240
HCQVTKTPQW REGPMGPKTL CNACGVRYRS GRLFPEYRPA ASPTFVASLH SNCHKKVVEM  300
RSRGIQGAVA VRGSMSASSN LHGSSVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214219KEKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.22e-42GATA family protein