PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05473.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 734aa MW: 81420.4 Da PI: 7.7228

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.6	5.5e-24	111	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t++ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + +++ l RDY05473.1 111 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFL--RAENGDL 205 89**************************986445444..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RDY05473.1 206 CVGIRRA 212 **997 PP
2	Auxin_resp	113.3	2.3e-37	267	350	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+++++Fe+vY+Prast+eF+++++ v++a++++++ GmRfkm fetedss++++ +Gt+++v+ ldp+rWpnS+Wr+L+ RDY05473.1 267 AITLAASNEAFEIVYYPRASTPEFCIRTSAVRSAMRIQWCSGMRFKMPFETEDSSRISWfMGTIASVQVLDPIRWPNSPWRLLQ 350 5678999***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MKETEKSLDP QLWHACAGGM VQMPAVNSKV FYFPQGHAEH AHSSVDFGAS STIRIPPLIL 60 CRVAAVKFLA DPETDEVFAR LRLVPLRSSD LDGEDFSDGG VSEGSEKPAS FAKTLTQSDA 120 NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VIAKDVHGEV WKFRHIYRGT PRRHLLTTGW 180 SSFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGVVGGP EPPSGWSSGG LGLGPYGAFS 240 AFLREESKVV RNGNVRPKVS GESVREAITL AASNEAFEIV YYPRASTPEF CIRTSAVRSA 300 MRIQWCSGMR FKMPFETEDS SRISWFMGTI ASVQVLDPIR WPNSPWRLLQ VTWDEPDLLH 360 NVKRVSPWLV ELVSNVPIIH LAPFSPPRKK LRFPQHPEFP LEVQFPIPTF SGNPLGSSTS 420 SPLCCLSDNA PAGIQGARHA QIGISLSDLH LNHKLQLGLL PTNVRQLDFH TGIPNGNITN 480 HGKSKESLSC LLTMGNSPKS LEKSDHVKRH QFLLFGQPIL TEQQITRRSS SDLLSQNCTT 540 TDDENKEKEK EKEKGFLSDS QSSVSPGKSS STAEFSWQLG LDTSHCKVFM ESEDVGRTLD 600 LSCLGSYEEL YMRLSNMFGI ERSEMLSHVL YRDTTGALKQ TGEEPFSEFM KTAKRLTILM 660 DSSSKDSRRV WITGTRNAEH GLDAASNKTG PLKAEYEQNI QSILIWFRVQ SGQCEYTGKL 720 WSSVQPTLCH LLVT

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MKETEKSLDP QLWHACAGGM VQMPAVNSKV FYFPQGHAEH AHSSVDFGAS STIRIPPLIL  60
CRVAAVKFLA DPETDEVFAR LRLVPLRSSD LDGEDFSDGG VSEGSEKPAS FAKTLTQSDA  120
NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VIAKDVHGEV WKFRHIYRGT PRRHLLTTGW  180
SSFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGVVGGP EPPSGWSSGG LGLGPYGAFS  240
AFLREESKVV RNGNVRPKVS GESVREAITL AASNEAFEIV YYPRASTPEF CIRTSAVRSA  300
MRIQWCSGMR FKMPFETEDS SRISWFMGTI ASVQVLDPIR WPNSPWRLLQ VTWDEPDLLH  360
NVKRVSPWLV ELVSNVPIIH LAPFSPPRKK LRFPQHPEFP LEVQFPIPTF SGNPLGSSTS  420
SPLCCLSDNA PAGIQGARHA QIGISLSDLH LNHKLQLGLL PTNVRQLDFH TGIPNGNITN  480
HGKSKESLSC LLTMGNSPKS LEKSDHVKRH QFLLFGQPIL TEQQITRRSS SDLLSQNCTT  540
TDDENKEKEK EKEKGFLSDS QSSVSPGKSS STAEFSWQLG LDTSHCKVFM ESEDVGRTLD  600
LSCLGSYEEL YMRLSNMFGI ERSEMLSHVL YRDTTGALKQ TGEEPFSEFM KTAKRLTILM  660
DSSSKDSRRV WITGTRNAEH GLDAASNKTG PLKAEYEQNI QSILIWFRVQ SGQCEYTGKL  720
WSSVQPTLCH LLVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein