PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY05326.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 909aa    MW: 100770 Da    PI: 6.3916
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY05326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.55.2e-23192293199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  RDY05326.1 192 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFI--WNEKNQL 286
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  RDY05326.1 287 LLGIRRA 293
                 ****997 PP

2Auxin_resp118.17.4e-39318401183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+v+YnPras+seFv++++k+ ka++ +++svGmRf+m fete+ss rr++Gt++g++dld+vrWpnS+Wrs+k
  RDY05326.1 318 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGITDLDSVRWPNSHWRSVK 401
                 79*********************************9789******************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 909 aa     Download sequence    
MAISENVPPV LQVVLFLGVD YGVSALATSW WRRMLGECLC NGLKQIEGSG FELGEKQKKV  60
KLDDMKLSTS GLGQQGHEGG EKKCLNSELW HACAGPLVSL PTAGTRVVYF PQGHSEQVSA  120
TTNREIDGHI PNYPSLPPQL ICQLHNVTMH ADVETDEVYA QMTLQPLTPQ EQKDTFLPME  180
LGIPSKQPSN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSQQPPAQ ELIARDLHDV  240
EWKFRHIFRG QPKRHLLTTG WSIFVSAKRL VAGDSVLFIW NEKNQLLLGI RRANRPQTVM  300
PSSVLSSDSM HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPLSKYIK AVYHTRISVG  360
MRFRMLFETE ESSVRRYMGT ITGITDLDSV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  420
IEPLTTFPMY PSLFPLRLKR PWHPGTSSLH DGRDEATNGL MWLRGGSVDQ GLNTLNYQGA  480
GMLPWMQQRL DPTLLGNDQN QQYQAMLAAG LQNLGSGYLM KQQMMNFQQP FHCLQQSGNN  540
NSPLQLQHQQ AIQQSVSSNM LQPQAHVMTE NLSQHLLQKP HNNQEVQAQQ QPHTYQDALL  600
IPSDQLHQRQ HSGVPSPSYS KPDFLDSSMK FPASVPPGQN MLSSLCPEGS GSLLNLSRSG  660
QSLLTEQLLP QQQWTQKYAP VQVNAYGSSM SHAQYPGKDS AMVLPHCNSD AQNPTLFGVN  720
IDSSGLLLPT TVPGYTTSSA DTNSSTMPLG ESGFQGSLYG CMQDSAELLR SAGHVDPQNQ  780
TQTFVKVYKS GSVGRSLDIS RFSSYHELRE ELAQMFGIEG KLEDPLRSGW QLVFVDREND  840
VLLLGDDPWE SFVNNVWYIK ILSPEDIQKM GEQAVESLAL SSGQRLNGTG AESQDIVSGP  900
PSIGSLEVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein