PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04976.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 992aa MW: 111191 Da PI: 7.2249

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.5	1.6e-08	232	289	19	76
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 + rgk ++ + +ev+++++ +g++r +k+ kw+n+ ++++k+ e+e++++ e+ RDY04976.1 232 LGMARGKTRADKDREVAEFLKGHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQI 289 4566889999999**************************************9965544 PP

Sequence ? help Back to Top
Protein Sequence Length: 992 aa Download sequence
MGDKGDTTKK QQQQQSQQQQ SQSHHHHQQT QQISSSPKGP REEPITEVRP IHHHQQQQQS 60 PVVVVAGAAP FISSPLYVSS GASSSPFEPQ FETTLNPKRA RYSGQWKQLL PSPPAQQKQS 120 QMAMLPTTES SPSPTTHTSS NPQQLQTQPS ATASSSDTTA SSPTHSPMPC SGQEGIKPEG 180 EQVHQQLRKG KYVSPVWKPN EMLWLARAWK EQYQGVGGSD SSSRAEQQQA ELGMARGKTR 240 ADKDREVAEF LKGHGVNRDA KTAGTKWDNM LGEFRKVYEW ERGGEREQIG KSYFRLSPYE 300 RKLHRLPASF DEDVFEELAQ FMGSRMRSSH GRAGSSFVSG DEARTALAAT RALPPPPRPF 360 KDDETPLSAR TKQLALTSGG EPFYHGSRGG LLGLDSLLDV SGSKELRRIG KIRMTWEESV 420 SLWAEEGEVH RGRVKLQSSS FLNADELTCF DDAMVPCPME YFEDGPLKGF SVDRFVLGQQ 480 VKVFGRRKSS PASASSGELI NLRGVGAAAI VTLDFRDPTE YYMECLLRAT PETLPSLFEL 540 KRYLQEAPPE ELRFPLRRDV YEDLPQGKEQ LFTSTSEHLD CRSIMYDIVG PIIRNNPSLS 600 QATSTSRDSF IPLWDDCINR IVSRFCPEEM TVVRKSTSAA MEKNQTMLQD QWPNVTGFVN 660 NYCLWRGEET DQLREGQPDP SSTLIAKLLW TFMDLPYVLG YYAVGNTVTF CALSRSQEGI 720 INRSDLHEVN LTTPTERLKA LVPCFRVGVL LASLSKRCES INNCKGFNFA YSDFERVCYG 780 NGVVTEVTPN TCTRVFSEKR KWLAVKEVYE ILDHRIPHAE FLFGYSERDL GLSFKPRGCR 840 LRPGNCEELV EALKYVTKAL VALHDLSFMH RDLRWEKVMR RMDREEEWFV SGFEEAAGAP 900 ELKGFSVLGA RGGHAPEMER GLHGVKVDVW GVGNLIRTCG LGGVPKMLRE LQNRCMEQNP 960 EQRPTAADCY HHLLQLQSSL SAAAATGGVL MM

Sequence ? help Back to Top

Protein Sequence Length: 992 aa Download sequence

MGDKGDTTKK QQQQQSQQQQ SQSHHHHQQT QQISSSPKGP REEPITEVRP IHHHQQQQQS  60
PVVVVAGAAP FISSPLYVSS GASSSPFEPQ FETTLNPKRA RYSGQWKQLL PSPPAQQKQS  120
QMAMLPTTES SPSPTTHTSS NPQQLQTQPS ATASSSDTTA SSPTHSPMPC SGQEGIKPEG  180
EQVHQQLRKG KYVSPVWKPN EMLWLARAWK EQYQGVGGSD SSSRAEQQQA ELGMARGKTR  240
ADKDREVAEF LKGHGVNRDA KTAGTKWDNM LGEFRKVYEW ERGGEREQIG KSYFRLSPYE  300
RKLHRLPASF DEDVFEELAQ FMGSRMRSSH GRAGSSFVSG DEARTALAAT RALPPPPRPF  360
KDDETPLSAR TKQLALTSGG EPFYHGSRGG LLGLDSLLDV SGSKELRRIG KIRMTWEESV  420
SLWAEEGEVH RGRVKLQSSS FLNADELTCF DDAMVPCPME YFEDGPLKGF SVDRFVLGQQ  480
VKVFGRRKSS PASASSGELI NLRGVGAAAI VTLDFRDPTE YYMECLLRAT PETLPSLFEL  540
KRYLQEAPPE ELRFPLRRDV YEDLPQGKEQ LFTSTSEHLD CRSIMYDIVG PIIRNNPSLS  600
QATSTSRDSF IPLWDDCINR IVSRFCPEEM TVVRKSTSAA MEKNQTMLQD QWPNVTGFVN  660
NYCLWRGEET DQLREGQPDP SSTLIAKLLW TFMDLPYVLG YYAVGNTVTF CALSRSQEGI  720
INRSDLHEVN LTTPTERLKA LVPCFRVGVL LASLSKRCES INNCKGFNFA YSDFERVCYG  780
NGVVTEVTPN TCTRVFSEKR KWLAVKEVYE ILDHRIPHAE FLFGYSERDL GLSFKPRGCR  840
LRPGNCEELV EALKYVTKAL VALHDLSFMH RDLRWEKVMR RMDREEEWFV SGFEEAAGAP  900
ELKGFSVLGA RGGHAPEMER GLHGVKVDVW GVGNLIRTCG LGGVPKMLRE LQNRCMEQNP  960
EQRPTAADCY HHLLQLQSSL SAAAATGGVL MM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-07	Trihelix family protein