PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04517.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 571aa MW: 63038.9 Da PI: 6.2021

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.4	2.7e-23	120	221	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+ltpsd+++ g +++p+ +a+++ ++ + l + d++g +We+++iyr++++r++lt+GW+++v+ ++L +gD+v+F+ ++s+++l RDY04517.1 120 FAKILTPSDANNGGGFSVPRFCADSIfpplnfvADPPVQ--NLFVADLHGFVWEFRHIYRGTPRRHLLTTGWSKYVNKKNLIAGDSVIFM--KNSSGNL 214 89*******************999*98767777..6********************************************..779 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RDY04517.1 215 FVGIRRS 221 ***97 PP
2	Auxin_resp	92	1e-30	271	354	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+P+a++seFvvk+e v +a+++ + +GmR+kma+et+dss+ ++ +Gt ++vs +++ +W+ +Wr+L+ RDY04517.1 271 AAELAAQNKPFEVVYYPKAGWSEFVVKAETVDEAMRIAWFPGMRVKMAMETDDSSRMTWfQGTLTSVSFSNNGQWRYCPWRMLQ 354 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MPRQGPASPS PSPSQPCPLD PKIWRACAGG LVEIPTVNSR VYYFAQGHFD QASSPPRNIP 60 PVVFSKSFTL CRVDSVQFLA DHLTDEVFAK LTLQPINDYF TAEPSVVPPA QKDDGMVISF 120 AKILTPSDAN NGGGFSVPRF CADSIFPPLN FVADPPVQNL FVADLHGFVW EFRHIYRGTP 180 RRHLLTTGWS KYVNKKNLIA GDSVIFMKNS SGNLFVGIRR STRLAFDVGN CPLSGKEEEE 240 EEEKEEEEAE EKKVFSRNGK GRLSAKDVVK AAELAAQNKP FEVVYYPKAG WSEFVVKAET 300 VDEAMRIAWF PGMRVKMAME TDDSSRMTWF QGTLTSVSFS NNGQWRYCPW RMLQITWDEP 360 EVLQNAKWVS PWQVELVSTH PALHPAFPSA KRFRAAHGSE VITTDGEGNP FSIFRNSAMG 420 HLNHTLFSVG TLPAGMQGAR HDVISASTIS NYPSEMSHLC TGNSFGNSRV PRLKTSSREI 480 NVGSSQSEEL SSDSRSSLHS CGTEIVGNND CNSNSVRLVL FGNVIPVSVE NGLDGTGCTG 540 DNGCTYTQLL DKLDEQWRLG WGSGTCDLDR T

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MPRQGPASPS PSPSQPCPLD PKIWRACAGG LVEIPTVNSR VYYFAQGHFD QASSPPRNIP  60
PVVFSKSFTL CRVDSVQFLA DHLTDEVFAK LTLQPINDYF TAEPSVVPPA QKDDGMVISF  120
AKILTPSDAN NGGGFSVPRF CADSIFPPLN FVADPPVQNL FVADLHGFVW EFRHIYRGTP  180
RRHLLTTGWS KYVNKKNLIA GDSVIFMKNS SGNLFVGIRR STRLAFDVGN CPLSGKEEEE  240
EEEKEEEEAE EKKVFSRNGK GRLSAKDVVK AAELAAQNKP FEVVYYPKAG WSEFVVKAET  300
VDEAMRIAWF PGMRVKMAME TDDSSRMTWF QGTLTSVSFS NNGQWRYCPW RMLQITWDEP  360
EVLQNAKWVS PWQVELVSTH PALHPAFPSA KRFRAAHGSE VITTDGEGNP FSIFRNSAMG  420
HLNHTLFSVG TLPAGMQGAR HDVISASTIS NYPSEMSHLC TGNSFGNSRV PRLKTSSREI  480
NVGSSQSEEL SSDSRSSLHS CGTEIVGNND CNSNSVRLVL FGNVIPVSVE NGLDGTGCTG  540
DNGCTYTQLL DKLDEQWRLG WGSGTCDLDR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-143	ARF family protein