PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY03411.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 712aa MW: 78158.6 Da PI: 6.8072

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY03411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.3	1.7e-24	152	253	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+ RDY03411.1 152 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDDGELR 247 99**************************963.3445679*********************************************..3489999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ RDY03411.1 248 LGIRRA 253 ***996 PP
2	Auxin_resp	123	2.2e-40	278	359	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+++F+v+YnPras+seF+++v+k++k+l++++svGmRf+m+feted++err++G+++g+sd+dpvrWp+SkWr+L RDY03411.1 278 VVNALSTRCAFSVCYNPRASSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWRCL 359 6899*****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MGLIDLNTTE DDETPLSASS SSSSSSHSGI STSASTVLAP PSVCLELWHA CAGPLISLPK 60 KGNLVVYLPQ GHFDHLQDFP LTAYNNIPPH VFCRVLDVKL HAEEGSDEVY CQVLLVPESE 120 QVEQSLREGE IDADGEEEDT EALVKSTTPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP 180 LDYSQQRPSQ ELVAKDLHGL EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR 240 GDDGELRLGI RRAAQLKSVG SFAVPSGQQL NPATLMDVVN ALSTRCAFSV CYNPRASSSE 300 FIIPVHKFLK SLDCSYSVGM RFRMRFETED AAERRFTGLI AGISDVDPVR WPGSKWRCLL 360 VRWDDIEAPR HNRVSPWEIE PSDSASSGSN LMAAGLKRTR IGMTSAKLEF PSPNGIGTSS 420 DFGESLRFRK VLQGQEILGV NTHFDGINGQ SPRLYELGRC YPGSNCSGIP APGNHIRMPN 480 MASDLSCNGI GFSESFRFQK VLQGQEILPS QPYGRALSIE EARGNGRFGL FDGFQLLNSR 540 NGWSGQMHAN DNAPHLHASS VTPAQVSSPS SVLMFQQAVN PVSNCDYNSN KRNKEMEGRV 600 HYQVKGRAFA SSQEGTIPFR MFDVHNQLGS SRSHDSASSL RSSQELVSSC KSSCRLFGFS 660 LTEDTHVANK EAEASTITCP LNSGPVFTRI VEDEFHPSHS HPSKVVGSNC TK

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MGLIDLNTTE DDETPLSASS SSSSSSHSGI STSASTVLAP PSVCLELWHA CAGPLISLPK  60
KGNLVVYLPQ GHFDHLQDFP LTAYNNIPPH VFCRVLDVKL HAEEGSDEVY CQVLLVPESE  120
QVEQSLREGE IDADGEEEDT EALVKSTTPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP  180
LDYSQQRPSQ ELVAKDLHGL EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR  240
GDDGELRLGI RRAAQLKSVG SFAVPSGQQL NPATLMDVVN ALSTRCAFSV CYNPRASSSE  300
FIIPVHKFLK SLDCSYSVGM RFRMRFETED AAERRFTGLI AGISDVDPVR WPGSKWRCLL  360
VRWDDIEAPR HNRVSPWEIE PSDSASSGSN LMAAGLKRTR IGMTSAKLEF PSPNGIGTSS  420
DFGESLRFRK VLQGQEILGV NTHFDGINGQ SPRLYELGRC YPGSNCSGIP APGNHIRMPN  480
MASDLSCNGI GFSESFRFQK VLQGQEILPS QPYGRALSIE EARGNGRFGL FDGFQLLNSR  540
NGWSGQMHAN DNAPHLHASS VTPAQVSSPS SVLMFQQAVN PVSNCDYNSN KRNKEMEGRV  600
HYQVKGRAFA SSQEGTIPFR MFDVHNQLGS SRSHDSASSL RSSQELVSSC KSSCRLFGFS  660
LTEDTHVANK EAEASTITCP LNSGPVFTRI VEDEFHPSHS HPSKVVGSNC TK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein