PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02855.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 452aa MW: 51619.1 Da PI: 6.2102

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.4	4.6e-24	88	185	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++d ++ RDY02855.1 88 KWTDTMVRLLIMAVFYIGDEAGSEGtdkkkastglmQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQNLLDTMD 185 7************998888854334567888888******************************************559***99999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MEPNGGHGMF SSLVGVENPH HLQHHPQMVP YGTHHDADPH PPHLPQPNKQ GYPSFSSAKN 60 KPQQSPLSDE DDDTSDPKRK VSPWQRMKWT DTMVRLLIMA VFYIGDEAGS EGTDKKKAST 120 GLMQKKGKWK SVSRAMMEKG FYVSPQQCED KFNDLNKRYK RVNDILGKGT ACRVVENQNL 180 LDTMDLSQKM KEEVKKLLNS KHLFFREMCA YHNSFGHGNN NNAPQQVESG GDVSQSQSQA 240 QAQPHQQQQQ QQCFHSSENM VRSLGGSEVE GLRMLKVGNG EEDDDDVDDD NDDDSEDDSD 300 EDEDESGEGG SRVHVGHGHE DEDDGRSMRK RARKGVGGVS ISPQLMQQLS AEVSGVFQDG 360 SRSAWDKKQW MRSRIMQLEE QQLSYQSQAF ELEKQRLKWA RFSSKKEREM ERAKLENERR 420 RLESERMVLL IRQKELELIS LHQQQQQQHS ST

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MEPNGGHGMF SSLVGVENPH HLQHHPQMVP YGTHHDADPH PPHLPQPNKQ GYPSFSSAKN  60
KPQQSPLSDE DDDTSDPKRK VSPWQRMKWT DTMVRLLIMA VFYIGDEAGS EGTDKKKAST  120
GLMQKKGKWK SVSRAMMEKG FYVSPQQCED KFNDLNKRYK RVNDILGKGT ACRVVENQNL  180
LDTMDLSQKM KEEVKKLLNS KHLFFREMCA YHNSFGHGNN NNAPQQVESG GDVSQSQSQA  240
QAQPHQQQQQ QQCFHSSENM VRSLGGSEVE GLRMLKVGNG EEDDDDVDDD NDDDSEDDSD  300
EDEDESGEGG SRVHVGHGHE DEDDGRSMRK RARKGVGGVS ISPQLMQQLS AEVSGVFQDG  360
SRSAWDKKQW MRSRIMQLEE QQLSYQSQAF ELEKQRLKWA RFSSKKEREM ERAKLENERR  420
RLESERMVLL IRQKELELIS LHQQQQQQHS ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	8e-68	Trihelix family protein