PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02213.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 806aa MW: 89529.8 Da PI: 8.494

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	7.7e-08	673	714	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE +++ + ++ +G++ +++Ia+ + +t +c+++++k RDY02213.1 673 PWTSEERKIFSEKFAAFGKD-FRKIASFLD-DKTTADCIEFYYK 714 8***************99.*****.*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
MRFATSAKML SGGARHQVLE EPRDNFGFVP CDMTLGEDKC RSSISQPSNR TIRAPRDPRR 60 QFWESANNTF HHLPSKRSIN DVLAHPSHPQ LSFANTYEHY NSNNNINNNY KESQGWESSM 120 GWNKCTNSIK FSSQGSRKTR DKNVIVRESD VNETEEIRKK IRLNWGEGLS KFEKKKCEEK 180 KCEESDRSPN VIRSSDCAVG VATTTSTSMT CSSMLGAGDT LCVKAANVGN DVRNLGGSPG 240 ARSQNHRQAF LERIDINSLT NLGSSLVELI ESHNPSSADS SLAMNKLLMW KAIILKVLEA 300 TETEIDSLDN ELKSLQSESE SGDRLPCSAA AGSLLVCHST KSCEDIGPSD KVTCPEPLQI 360 APSGEGNVEN MPLSSNLQIS VHDKCKKDDI NSPGTATSKF VEALPMINKA VSSCDATRYG 420 TYSEDLDGHQ STTKKCLVPY GQVAGVSSCG DGNSSSSMEI KNGMDANSSA SFYSSTDDTS 480 YNTIISSNKE SAKRACEVFS KLLPKECGKI SNVGVSSSSF SYNDAFMKEK FAEKKWFASF 540 KEKVLTIKYE ALDHLWKKDL CLQSLRKKPQ TSYRKLELDL PNIGSACRKK RSSNRYRFPF 600 PAGNQLSLVP TSDMVNYTSQ LLSKSKDKVN RRILKMPAFI LDEKDKKISK FKSSNGLVED 660 PLAIEKERAM INPWTSEERK IFSEKFAAFG KDFRKIASFL DDKTTADCIE FYYKNHKPNC 720 LEKIKKKEGD KSGELTTVKT GLTASGRKRN RKVNDDSLET LSEAPGMARS GRLLLWSGYD 780 NMKKSTGDDS MREIEDEREI VAAEAL

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

MRFATSAKML SGGARHQVLE EPRDNFGFVP CDMTLGEDKC RSSISQPSNR TIRAPRDPRR  60
QFWESANNTF HHLPSKRSIN DVLAHPSHPQ LSFANTYEHY NSNNNINNNY KESQGWESSM  120
GWNKCTNSIK FSSQGSRKTR DKNVIVRESD VNETEEIRKK IRLNWGEGLS KFEKKKCEEK  180
KCEESDRSPN VIRSSDCAVG VATTTSTSMT CSSMLGAGDT LCVKAANVGN DVRNLGGSPG  240
ARSQNHRQAF LERIDINSLT NLGSSLVELI ESHNPSSADS SLAMNKLLMW KAIILKVLEA  300
TETEIDSLDN ELKSLQSESE SGDRLPCSAA AGSLLVCHST KSCEDIGPSD KVTCPEPLQI  360
APSGEGNVEN MPLSSNLQIS VHDKCKKDDI NSPGTATSKF VEALPMINKA VSSCDATRYG  420
TYSEDLDGHQ STTKKCLVPY GQVAGVSSCG DGNSSSSMEI KNGMDANSSA SFYSSTDDTS  480
YNTIISSNKE SAKRACEVFS KLLPKECGKI SNVGVSSSSF SYNDAFMKEK FAEKKWFASF  540
KEKVLTIKYE ALDHLWKKDL CLQSLRKKPQ TSYRKLELDL PNIGSACRKK RSSNRYRFPF  600
PAGNQLSLVP TSDMVNYTSQ LLSKSKDKVN RRILKMPAFI LDEKDKKISK FKSSNGLVED  660
PLAIEKERAM INPWTSEERK IFSEKFAAFG KDFRKIASFL DDKTTADCIE FYYKNHKPNC  720
LEKIKKKEGD KSGELTTVKT GLTASGRKRN RKVNDDSLET LSEAPGMARS GRLLLWSGYD  780
NMKKSTGDDS MREIEDEREI VAAEAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	3e-57	MYB family protein