PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00525.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 488aa MW: 53142.6 Da PI: 6.3598

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.7	1.8e-19	108	194	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ ++l+rg+l++ +Weev++++ r + ++s +qCk+k +nl+kryk ++++++++ + s+s++p+f+qle RDY00525.1 108 EWSDTAIVCLLDAYTEKFTQLNRGNLRGRDWEEVAAVVseRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSG-CISTSHWPWFKQLE 194 5***********************************666677899*********************9.99999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MASCDDDDDF SLLRDDNHHL HQPYAPHHHF SPAAVSVASV SVASVPPKPV SDDAEDYGNP 60 FDDDGGSEKR KEREEIGEGA TSYGFNKRSK AVSSSAAAAA EYRKDREEWS DTAIVCLLDA 120 YTEKFTQLNR GNLRGRDWEE VAAVVSERCE NQSKSVEQCK NKVDNLKKRY KLERHRMSSG 180 CISTSHWPWF KQLEQIVGNS LPAKFSDDDK AIVSAGTSPR QSKRYGVATP STGGQASSMK 240 SKALSNLRWR RVVLKISGAA LTGSDTCNID PKVAMLVARE VAIASRVGVE VAIVVGGRNF 300 FSGDAWVTAT GLERCTAYQV GMMATVMNSI LLQSTLEKMG VQTRVQTSVA MQEFAEPYNR 360 QRAIRHLEKG RVVIFGGIGF GAGNPLFSTD IAAALRASEL NAEAVLKGTN VDGVYDCNSR 420 DNNFTFEHIS FRELGSRGVT SMDMSALTFC EENAIPVVVF NLLEPGNISK ALCGEQVGTL 480 IDQTGAIS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MASCDDDDDF SLLRDDNHHL HQPYAPHHHF SPAAVSVASV SVASVPPKPV SDDAEDYGNP  60
FDDDGGSEKR KEREEIGEGA TSYGFNKRSK AVSSSAAAAA EYRKDREEWS DTAIVCLLDA  120
YTEKFTQLNR GNLRGRDWEE VAAVVSERCE NQSKSVEQCK NKVDNLKKRY KLERHRMSSG  180
CISTSHWPWF KQLEQIVGNS LPAKFSDDDK AIVSAGTSPR QSKRYGVATP STGGQASSMK  240
SKALSNLRWR RVVLKISGAA LTGSDTCNID PKVAMLVARE VAIASRVGVE VAIVVGGRNF  300
FSGDAWVTAT GLERCTAYQV GMMATVMNSI LLQSTLEKMG VQTRVQTSVA MQEFAEPYNR  360
QRAIRHLEKG RVVIFGGIGF GAGNPLFSTD IAAALRASEL NAEAVLKGTN VDGVYDCNSR  420
DNNFTFEHIS FRELGSRGVT SMDMSALTFC EENAIPVVVF NLLEPGNISK ALCGEQVGTL  480
IDQTGAIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein